Multi-site benchmark classification of major depressive disorder using machine learning on cortical and subcortical measures

Autor: Vladimir Belov, Tracy Erwin-Grabner, Moji Aghajani, Andre Aleman, Alyssa R. Amod, Zeynep Basgoze, Francesco Benedetti, Bianca Besteher, Robin Bülow, Christopher R. K. Ching, Colm G. Connolly, Kathryn Cullen, Christopher G. Davey, Danai Dima, Annemiek Dols, Jennifer W. Evans, Cynthia H. Y. Fu, Ali Saffet Gonul, Ian H. Gotlib, Hans J. Grabe, Nynke Groenewold, J Paul Hamilton, Ben J. Harrison, Tiffany C. Ho, Benson Mwangi, Natalia Jaworska, Neda Jahanshad, Bonnie Klimes-Dougan, Sheri-Michelle Koopowitz, Thomas Lancaster, Meng Li, David E. J. Linden, Frank P. MacMaster, David M. A. Mehler, Elisa Melloni, Bryon A. Mueller, Amar Ojha, Mardien L. Oudega, Brenda W. J. H. Penninx, Sara Poletti, Edith Pomarol-Clotet, Maria J. Portella, Elena Pozzi, Liesbeth Reneman, Matthew D. Sacchet, Philipp G. Sämann, Anouk Schrantee, Kang Sim, Jair C. Soares, Dan J. Stein, Sophia I. Thomopoulos, Aslihan Uyar-Demir, Nic J. A. van der Wee, Steven J. A. van der Werff, Henry Völzke, Sarah Whittle, Katharina Wittfeld, Margaret J. Wright, Mon-Ju Wu, Tony T. Yang, Carlos Zarate, Dick J. Veltman, Lianne Schmaal, Paul M. Thompson, Roberto Goya-Maldonado, the ENIGMA Major Depressive Disorder working group

Publikováno v: Scientific Reports, Vol 14, Iss 1, Pp 1-18 (2024)

Abstract Machine learning (ML) techniques have gained popularity in the neuroimaging field due to their potential for classifying neuropsychiatric disorders. However, the diagnostic predictive power of the existing algorithms has been limited by smal

Externí odkaz: https://doaj.org/article/da78bdb629a3452faf57ce1549e6ab7a

The Psychological Science Accelerator’s COVID-19 rapid-response dataset

Autor: Erin M. Buchanan, Savannah C. Lewis, Bastien Paris, Patrick S. Forscher, Jeffrey M. Pavlacic, Julie E. Beshears, Shira Meir Drexler, Amélie Gourdon-Kanhukamwe, Peter R Mallik, Miguel Alejandro A. Silan, Jeremy K. Miller, Hans IJzerman, Hannah Moshontz, Jennifer L. Beaudry, Jordan W. Suchow, Christopher R. Chartier, Nicholas A. Coles, MohammadHasan Sharifian, Anna Louise Todsen, Carmel A. Levitan, Flávio Azevedo, Nicole Legate, Blake Heller, Alexander J. Rothman, Charles A. Dorison, Brian P. Gill, Ke Wang, Vaughan W. Rees, Nancy Gibbs, Amit Goldenberg, Thuy-vy Thi Nguyen, James J. Gross, Gwenaêl Kaminski, Claudia C. von Bastian, Mariola Paruzel-Czachura, Farnaz Mosannenzadeh, Soufian Azouaghe, Alexandre Bran, Susana Ruiz-Fernandez, Anabela Caetano Santos, Niv Reggev, Janis H. Zickfeld, Handan Akkas, Myrto Pantazi, Ivan Ropovik, Max Korbmacher, Patrícia Arriaga, Biljana Gjoneska, Lara Warmelink, Sara G. Alves, Gabriel Lins de Holanda Coelho, Stefan Stieger, Vidar Schei, Paul H. P. Hanel, Barnabas Szaszi, Maksim Fedotov, Jan Antfolk, Gabriela-Mariana Marcu, Jana Schrötter, Jonas R. Kunst, Sandra J. Geiger, Adeyemi Adetula, Halil Emre Kocalar, Julita Kielińska, Pavol Kačmár, Ahmed Bokkour, Oscar J. Galindo-Caballero, Ikhlas Djamai, Sara Johanna Pöntinen, Bamikole Emmanuel AGESIN, Teodor Jernsäther, Anum Urooj, Nikolay R. Rachev, Maria Koptjevskaja-Tamm, Murathan Kurfalı, Ilse L. Pit, Ranran Li, Sami Çoksan, Dmitrii Dubrov, Tamar Elise Paltrow, Gabriel Baník, Tatiana Korobova, Anna Studzinska, Xiaoming Jiang, John Jamir Benzon R. Aruta, Jáchym Vintr, Faith Chiu, Lada Kaliska, Jana B. Berkessel, Murat Tümer, Sara Morales-Izquierdo, Hu Chuan-Peng, Kevin Vezirian, Anna Dalla Rosa, Olga Bialobrzeska, Martin R. Vasilev, Julia Beitner, Ondřej Kácha, Barbara Žuro, Minja Westerlund, Mina Nedelcheva-Datsova, Andrej Findor, Dajana Krupić, Marta Kowal, Adrian Dahl Askelund, Razieh Pourafshari, Jasna Milošević Đorđević, Nadya-Daniela Schmidt, Ekaterina Baklanova, Anna Szala, Ilya Zakharov, Marek A. Vranka, Keiko Ihaya, Caterina Grano, Nicola Cellini, Michał Białek, Lisa Anton-Boicuk, Ilker Dalgar, Arca Adıgüzel, Jeroen P. H. Verharen, Princess Lovella G. Maturan, Angelos P. Kassianos, Raquel Oliveira, Martin Čadek, Vera Cubela Adoric, Asil Ali Özdoğru, Therese E. Sverdrup, Balazs Aczel, Danilo Zambrano, Afroja Ahmed, Christian K. Tamnes, Yuki Yamada, Leonhard Volz, Naoyuki Sunami, Lilian Suter, Luc Vieira, Agata Groyecka-Bernard, Julia Arhondis Kamburidis, Ulf-Dietrich Reips, Mikayel Harutyunyan, Gabriel Agboola Adetula, Tara Bulut Allred, Krystian Barzykowski, Benedict G Antazo, Andras N. Zsido, Dušana Dušan Šakan, Wilson Cyrus-Lai, Lina Pernilla Ahlgren, Matej Hruška, Diego Vega, Efisio Manunta, Aviv Mokady, Mariagrazia Capizzi, Marcel Martončik, Nicolas Say, Katarzyna Filip, Roosevelt Vilar, Karolina Staniaszek, Milica Vdovic, Matus Adamkovic, Niklas Johannes, Nandor Hajdu, Noga Cohen, Clara Overkott, Dino Krupić, Barbora Hubena, Gustav Nilsonne, Giovanna Mioni, Claudio Singh Solorzano, Tatsunori Ishii, Zhang Chen, Elizaveta Kushnir, Cemre Karaarslan, Rafael R. Ribeiro, Ahmed Khaoudi, Małgorzata Kossowska, Jozef Bavolar, Karlijn Hoyer, Marta Roczniewska, Alper Karababa, Maja Becker, Renan P. Monteiro, Yoshihiko Kunisato, Irem Metin-Orta, Sylwia Adamus, Luca Kozma, Gabriela Czarnek, Artur Domurat, Eva Štrukelj, Daniela Serrato Alvarez, Michal Parzuchowski, Sébastien Massoni, Johanna Czamanski-Cohen, Ekaterina Pronizius, Fany Muchembled, Kevin van Schie, Aslı Saçaklı, Evgeniya Hristova, Anna O. Kuzminska, Abdelilah Charyate, Gijsbert Bijlstra, Reza Afhami, Nadyanna M. Majeed, Erica D. Musser, Miroslav Sirota, Robert M. Ross, Siu Kit Yeung, Marietta Papadatou-Pastou, Francesco Foroni, Inês A. T. Almeida, Dmitry Grigoryev, David M. G. Lewis, Dawn L. Holford, Steve M. J. Janssen, Srinivasan Tatachari, Carlota Batres, Jonas K. Olofsson, Shimrit Daches, Anabel Belaus, Gerit Pfuhl, Nadia Sarai Corral-Frias, Daniela Sousa, Jan Philipp Röer, Peder Mortvedt Isager, Hendrik Godbersen, Radoslaw B. Walczak, Natalia Van Doren, Dongning Ren, Tripat Gill, Martin Voracek, Lisa M. DeBruine, Michele Anne, Sanja Batić Očovaj, Andrew G. Thomas, Alexios Arvanitis, Thomas Ostermann, Kelly Wolfe, Nwadiogo Chisom Arinze, Carsten Bundt, Claus Lamm, Robert J Calin-Jageman, William E. Davis, Maria Karekla, Saša Zorjan, Lisa M. Jaremka, Jim Uttley, Monika Hricova, Monica A Koehn, Natalia Kiselnikova, Hui Bai, Anthony J. Krafnick, Busra Bahar Balci, Tonia Ballantyne, Samuel Lins, Zahir Vally, Celia Esteban-Serna, Kathleen Schmidt, Paulo Manuel L. Macapagal, Paulina Szwed, Przemysław Marcin Zdybek, David Moreau, W. Matthew Collins, Jennifer A. Joy-Gaba, Iris Vilares, Ulrich S. Tran, Jordane Boudesseul, Nihan Albayrak-Aydemir, Barnaby James Wyld Dixson, Jennifer T Perillo, Ana Ferreira, Erin C. Westgate, Christopher L. Aberson, Azuka Ikechukwu Arinze, Bastian Jaeger, Muhammad Mussaffa Butt, Jaime R. Silva, Daniel Shafik Storage, Allison P Janak, William Jiménez-Leal, Jose A. Soto, Agnieszka Sorokowska, Randy McCarthy, Alexa M Tullett, Martha Frias-Armenta, Matheus Fernando Felix Ribeiro, Andree Hartanto, Paul A. G. Forbes, Megan L. Willis, María del Carmen Tejada R, Adriana Julieth Olaya Torres, Ian D Stephen, David C. Vaidis, Anabel de la Rosa-Gómez, Karen Yu, Clare A. M. Sutherland, Mathi Manavalan, Behzad Behzadnia, Jan Urban, Ernest Baskin, Joseph P. McFall, Chisom Esther Ogbonnaya, Cynthia H. Y. Fu, Rima-Maria Rahal, Izuchukwu L. G. Ndukaihe, Thomas J. Hostler, Heather Barry Kappes, Piotr Sorokowski, Meetu Khosla, Ljiljana B. Lazarevic, Luis Eudave, Johannes K. Vilsmeier, Elkin O. Luis, Rafał Muda, Elena Agadullina, Rodrigo A. Cárcamo, Crystal Reeck, Gulnaz Anjum, Mónica Camila Toro Venegas, Michal Misiak, Richard M. Ryan, Nora L. Nock, Giovanni A. Travaglino, Michael C. Mensink, Gilad Feldman, Aaron L. Wichman, Weilun Chou, Ignazio Ziano, Martin Seehuus, William J. Chopik, Franki Y. H. Kung, Joelle Carpentier, Leigh Ann Vaughn, Hongfei Du, Qinyu Xiao, Tiago J. S. Lima, Chris Noone, Sandersan Onie, Frederick Verbruggen, Theda Radtke, Maximilian A. Primbs

Publikováno v: Scientific Data, Vol 10, Iss 1, Pp 1-15 (2023)

Measurement(s) COVID-19 Protocols, Restrictions • Health Behaviors • Personality and Behavioral Change, CTCAE • Emotion • Message Framing • Self-Determination Technology Type(s) Survey • Experiment Design Type Factor Type(s) COVID-19 Prot

Externí odkaz: https://doaj.org/article/23c1e613ab7f4eed9fa8bdb95f15e697

AI-based dimensional neuroimaging system for characterizing heterogeneity in brain structure and function in major depressive disorder: COORDINATE-MDD consortium design and rationale

Autor: Cynthia H. Y. Fu, Guray Erus, Yong Fan, Mathilde Antoniades, Danilo Arnone, Stephen R. Arnott, Taolin Chen, Ki Sueng Choi, Cherise Chin Fatt, Benicio N. Frey, Vibe G. Frokjaer, Melanie Ganz, Jose Garcia, Beata R. Godlewska, Stefanie Hassel, Keith Ho, Andrew M. McIntosh, Kun Qin, Susan Rotzinger, Matthew D. Sacchet, Jonathan Savitz, Haochang Shou, Ashish Singh, Aleks Stolicyn, Irina Strigo, Stephen C. Strother, Duygu Tosun, Teresa A. Victor, Dongtao Wei, Toby Wise, Rachel D. Woodham, Roland Zahn, Ian M. Anderson, J. F. William Deakin, Boadie W. Dunlop, Rebecca Elliott, Qiyong Gong, Ian H. Gotlib, Catherine J. Harmer, Sidney H. Kennedy, Gitte M. Knudsen, Helen S. Mayberg, Martin P. Paulus, Jiang Qiu, Madhukar H. Trivedi, Heather C. Whalley, Chao-Gan Yan, Allan H. Young, Christos Davatzikos

Publikováno v: BMC Psychiatry, Vol 23, Iss 1, Pp 1-18 (2023)

Abstract Background Efforts to develop neuroimaging-based biomarkers in major depressive disorder (MDD), at the individual level, have been limited to date. As diagnostic criteria are currently symptom-based, MDD is conceptualized as a disorder rathe

Externí odkaz: https://doaj.org/article/c4130b307f0648e6a85a0f1b24a7458d

Compact Mach-Zehnder Interferometer for Practical Vernier Effect Sensing System With High Extinction Ratio

Autor: Maolin Dai, Xuanyi Liu, Zhenmin Chen, Yuanfang Zhao, M. S. Aruna Gandhi, Qian Li, H. Y. Fu

Publikováno v: IEEE Photonics Journal, Vol 14, Iss 3, Pp 1-6 (2022)

Recently, Vernier effect is introduced into fiber optic interferometric sensors to enhance the sensitivity. To achieve a high-quality of the Vernier spectrum, the match of the free spectral range (FSR) and the extinction ratio (ER) in two arms is req

Externí odkaz: https://doaj.org/article/5d0ed43f1e9848dea320d60dacbfe784

Fiber-Chip Bi-Wavelength Multiplexing With Subwavelength Single-Etch Grating Coupler and Diplexer

Autor: Lirong Cheng, Simei Mao, Yinghui Wang, H. Y. Fu

Publikováno v: IEEE Photonics Journal, Vol 14, Iss 1, Pp 1-6 (2022)

We propose a silicon photonicgrating coupling scheme for dual-band multiplexing in optical fibers. By utilizing subwavelength grating effective refractive index engineering, a dual-band operating grating coupler and a wavelength-polarization diplexer

Externí odkaz: https://doaj.org/article/edfb93943d6a4203b2fbe87f40dec5bf