Single-cell landscape of innate and acquired drug resistance in acute myeloid leukemia.

Autor: Wegmann R; Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland., Bonilla X; Department of Computer Science, ETH Zurich, Zurich, Switzerland., Casanova R; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland., Chevrier S; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland., Coelho R; Department of Biomedicine, University Hospital Basel and University of Basel, Basel, Switzerland., Esposito C; Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Ficek-Pascual J; Department of Computer Science, ETH Zurich, Zurich, Switzerland., Goetze S; Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; ETH PHRT Swiss Multi-Omics Center (SMOC), Lausanne, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Gut G; Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Jacob F; Department of Biomedicine, University Hospital Basel and University of Basel, Basel, Switzerland., Jacobs A; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland., Kuipers J; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland., Lischetti U; Department of Biomedicine, University Hospital Basel and University of Basel, Basel, Switzerland., Mena J; Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland., Milani ES; Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Prummer M; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.; NEXUS Personalized Health Technologies, ETH Zurich, Zurich, Switzerland., Del Castillo JS; Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Singer F; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.; NEXUS Personalized Health Technologies, ETH Zurich, Zurich, Switzerland., Sivapatham S; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland., Toussaint NC; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.; NEXUS Personalized Health Technologies, ETH Zurich, Zurich, Switzerland.; Swiss Data Science Center, ETH Zürich, Zurich, Switzerland., Vilinovszki O; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland., Wildschut MHE; Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland.; Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland., Thavayogarajah T; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland., Malani D; Harvard Medical School and Dana-Farber Cancer Institute, Boston, USA., Aebersold R; Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland., Bacac M; Roche Pharmaceutical Research and Early Development, Roche Innovation Center Zurich, Zurich, Switzerland., Beerenwinkel N; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland., Beisel C; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland., Bodenmiller B; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland.; Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Heinzelmann-Schwarz V; Department of Biomedicine, University Hospital Basel and University of Basel, Basel, Switzerland., Koelzer VH; Department of Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland.; University of Zurich, Faculty of Medicine, Zurich, Switzerland., Levesque MP; Department of Dermatology, University Hospital Zurich, Zurich, Switzerland., Moch H; Department of Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland.; University of Zurich, Faculty of Medicine, Zurich, Switzerland., Pelkmans L; Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Rätsch G; Department of Computer Science, ETH Zurich, Zurich, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.; AI Center at ETH Zurich, Zurich, Switzerland., Tolnay M; Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland., Wicki A; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland.; University of Zurich, Faculty of Medicine, Zurich, Switzerland., Wollscheid B; Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Manz MG; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland. markus.manz@usz.ch., Snijder B; Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland. snijder@imsb.biol.ethz.ch.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland. snijder@imsb.biol.ethz.ch., Theocharides APA; Department of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland. alexandre.theocharides@usz.ch.

Publikováno v: Nature communications [Nat Commun] 2024 Oct 30; Vol. 15 (1), pp. 9402. Date of Electronic Publication: 2024 Oct 30.

Degree-Kirchhoff Indices and Gutman Indices of Spiro and Polyphenyl Hexagonal Chains.

Autor: Chen, Dandan¹ (AUTHOR), Ma, Xiaoling¹ (AUTHOR) mxling2018@163.com, Bian, Hong² (AUTHOR)

Publikováno v: Polycyclic Aromatic Compounds. 2023, Vol. 43 Issue 9, p7700-7718. 19p.

Multimodal spatiotemporal phenotyping of human retinal organoid development.

Autor: Wahle P; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Brancati G; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Harmel C; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland.; Institute of Human Biology (IHB), Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland., He Z; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland., Gut G; Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Del Castillo JS; Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Xavier da Silveira Dos Santos A; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland.; Institute of Human Biology (IHB), Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland., Yu Q; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland.; Institute of Human Biology (IHB), Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland., Noser P; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland., Fleck JS; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland., Gjeta B; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland.; Institute of Human Biology (IHB), Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland., Pavlinić D; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Picelli S; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Hess M; Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland., Schmidt GW; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland., Lummen TTA; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland., Hou Y; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Galliker P; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Goldblum D; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Balogh M; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Cowan CS; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland., Scholl HPN; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Roska B; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Renner M; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland.; Department of Ophthalmology, University of Basel, Basel, Switzerland., Pelkmans L; Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland. lucas.pelkmans@imls.uzh.ch., Treutlein B; Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland. barbara.treutlein@bsse.ethz.ch., Camp JG; Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland. jarrettgrayson.camp@unibas.ch.; Department of Ophthalmology, University of Basel, Basel, Switzerland. jarrettgrayson.camp@unibas.ch.; Institute of Human Biology (IHB), Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland. jarrettgrayson.camp@unibas.ch.

Publikováno v: Nature biotechnology [Nat Biotechnol] 2023 Dec; Vol. 41 (12), pp. 1765-1775. Date of Electronic Publication: 2023 May 08.

Effect of gamma rays and accelerated electron beam on medullary lipids decomposition: influence of dose and irradiation temperature.

Autor: Jastrzebska A; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland., Grazka E; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland., Marowska J; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland., Gut G; Department of Transplantology and Central Tissue Bank, Medical University of Warsaw, Chalubinskiego 5, 02-004, Warsaw, Poland.; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland., Uhrynowska-Tyszkiewicz I; Department of Transplantology and Central Tissue Bank, Medical University of Warsaw, Chalubinskiego 5, 02-004, Warsaw, Poland.; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland., Kaminski A; Department of Transplantology and Central Tissue Bank, Medical University of Warsaw, Chalubinskiego 5, 02-004, Warsaw, Poland. artur.kaminski@wum.edu.pl.; National Centre for Tissue and Cell Banking, Chalubinskiego 5, 02-004, Warsaw, Poland. artur.kaminski@wum.edu.pl.

Publikováno v: Cell and tissue banking [Cell Tissue Bank] 2022 Dec; Vol. 23 (4), pp. 833-844. Date of Electronic Publication: 2022 Mar 10.

Author Correction: Learning single-cell perturbation responses using neural optimal transport.

Autor: Bunne C; Department of Computer Science, ETH Zurich, Zürich, Switzerland.; AI Center, ETH Zurich, Zürich, Switzerland., Stark SG; Department of Computer Science, ETH Zurich, Zürich, Switzerland.; AI Center, ETH Zurich, Zürich, Switzerland.; Medical Informatics Unit, University of Zurich Hospital, Zürich, Switzerland.; Swiss Institute of Bioinformatics, Zurich, Switzerland., Gut G; Department of Molecular Life Sciences, University of Zurich, Zürich, Switzerland., Del Castillo JS; Department of Molecular Life Sciences, University of Zurich, Zürich, Switzerland., Levesque M; Department of Dermatology, University of Zurich Hospital, University of Zurich, Zürich, Switzerland., Lehmann KV; Department of Computer Science, ETH Zurich, Zürich, Switzerland. kjlehmann@ukaachen.de.; Cancer Research Center Cologne-Essen, Site: Center Integrated Oncology Aachen, Aachen, Germany. kjlehmann@ukaachen.de., Pelkmans L; Department of Molecular Life Sciences, University of Zurich, Zürich, Switzerland. lucas.pelkmans@mls.uzh.ch., Krause A; Department of Computer Science, ETH Zurich, Zürich, Switzerland. krausea@ethz.ch.; AI Center, ETH Zurich, Zürich, Switzerland. krausea@ethz.ch., Rätsch G; Department of Computer Science, ETH Zurich, Zürich, Switzerland. gunnar.raetsch@inf.ethz.ch.; AI Center, ETH Zurich, Zürich, Switzerland. gunnar.raetsch@inf.ethz.ch.; Medical Informatics Unit, University of Zurich Hospital, Zürich, Switzerland. gunnar.raetsch@inf.ethz.ch.; Swiss Institute of Bioinformatics, Zurich, Switzerland. gunnar.raetsch@inf.ethz.ch.; Department of Biology, ETH Zurich, Zürich, Switzerland. gunnar.raetsch@inf.ethz.ch.

Publikováno v: Nature methods [Nat Methods] 2023 Nov; Vol. 20 (11), pp. 1830.