Exploring the Potential of Structure-Based Deep Learning Approaches for T cell Receptor Design.

Autor: Ribeiro-Filho HV; Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas 13083-100, Brazil., Jara GE; Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas 13083-100, Brazil., Guerra JVS; Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas 13083-100, Brazil.; Graduate Program in Pharmaceutical Sciences, Faculty of Pharmaceutical Sciences, University of Campinas, Campinas, São Paulo, 13083-871, Brazil., Cheung M; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850, USA.; Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, USA., Felbinger NR; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850, USA.; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742, USA., Pereira JGC; Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas 13083-100, Brazil., Pierce BG; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850, USA.; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742, USA., Lopes-de-Oliveira PS; Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas 13083-100, Brazil.; Graduate Program in Pharmaceutical Sciences, Faculty of Pharmaceutical Sciences, University of Campinas, Campinas, São Paulo, 13083-871, Brazil.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 Apr 24. Date of Electronic Publication: 2024 Apr 24.

Cavity Characterization in Supramolecular Cages.

Autor: Guerra JVS; Brazilian Center for Research in Energy and Materials (CNPEM), Brazilian Biosciences National Laboratory (LNBio), Rua Giuseppe Máximo Scolfaro, 10000, Bosque Das Palmeiras, Campinas, SP 13083-100, Brazil., Alves LFG; Brazilian Center for Research in Energy and Materials (CNPEM), Brazilian Biosciences National Laboratory (LNBio), Rua Giuseppe Máximo Scolfaro, 10000, Bosque Das Palmeiras, Campinas, SP 13083-100, Brazil., Bourissou D; Laboratoire Hétérochimie Fondamentale et Appliquée (LHFA, UMR 5069), CNRS, Université Toulouse III─Paul Sabatier, 118 Route de Narbonne, Toulouse 31062, Cedex 09, France., Lopes-de-Oliveira PS; Brazilian Center for Research in Energy and Materials (CNPEM), Brazilian Biosciences National Laboratory (LNBio), Rua Giuseppe Máximo Scolfaro, 10000, Bosque Das Palmeiras, Campinas, SP 13083-100, Brazil., Szalóki G; Laboratoire Hétérochimie Fondamentale et Appliquée (LHFA, UMR 5069), CNRS, Université Toulouse III─Paul Sabatier, 118 Route de Narbonne, Toulouse 31062, Cedex 09, France.

Publikováno v: Journal of chemical information and modeling [J Chem Inf Model] 2023 Jun 26; Vol. 63 (12), pp. 3772-3785. Date of Electronic Publication: 2023 May 02.

DNA methylation fingerprint of monozygotic twins and their singleton sibling with intellectual disability carrying a novel KDM5C mutation.

Autor: Guerra JVS; Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil; Postgraduate Program in Biosciences and Technology of Bioactive Products, Institute of Biology, University of Campinas, Campinas, SP, Brazil. Electronic address: jvsguerra@gmail.com., Oliveira-Santos J; Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, SP, Brazil. Electronic address: josesantos.biologiamolecular@hotmail.com., Oliveira DF; Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, SP, Brazil; Department of Neuropsychiatry and Keizo Asami Laboratory, Federal University of Pernambuco, Recife, PE, Brazil. Electronic address: oliveira.danyllo@gmail.com., Leal GF; University of Pernambuco and Professor Fernando Figueira Integral Medicine Institute, Recife, PE, Brazil. Electronic address: gabferraz@gmail.com., Oliveira JRM; Department of Neuropsychiatry and Keizo Asami Laboratory, Federal University of Pernambuco, Recife, PE, Brazil. Electronic address: joao.ricardo@ufpe.br., Costa SS; Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, SP, Brazil. Electronic address: silvinha.costa@gmail.com., Krepischi ACV; Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, SP, Brazil. Electronic address: ana.krepischi@ib.usp.br., Vianna-Morgante AM; Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, SP, Brazil. Electronic address: avmorgan@ib.usp.br., Maschietto M; Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil; Boldrini Children's Hospital, Campinas, SP, Brazil. Electronic address: marianamasc@gmail.com.

Publikováno v: European journal of medical genetics [Eur J Med Genet] 2020 Mar; Vol. 63 (3), pp. 103737. Date of Electronic Publication: 2019 Aug 13.