Genomic erosion and horizontal gene transfer shape functional differences of the ExlA toxin in Pseudomonas spp.

Autor: Job, Viviana, Gomez-Valero, Laura, Renier, Adèle, Rusniok, Christophe, Bouillot, Stephanie, Chenal-Francisque, Viviane, Gueguen, Erwan, Adrait, Annie, Robert-Genthon, Mylène, Jeannot, Katy, Panchev, Peter, Elsen, Sylvie, Fauvarque, Marie-Odile, Couté, Yohann, Buchrieser, Carmen, Attrée, Ina

Publikováno v: In iScience 15 July 2022 25(7)

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TnSeek : analysing Tn-seq data for multiple conditions and multiple species

Autor: Couderc, Loïc, Gueguen, Erwan, Brunin, Maxime, Flissi, Areski, Marot, Guillemette, Condemine, Guy, Touzet, Hélène

Publikováno v: Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2022)
Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2022), Jul 2022, Rennes, France

International audience

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::240b5081dabcd840fc929949c5866e23
https://hal.science/hal-03827389/document

Specificity and genetic polymorphism in the Vfm quorum sensing system of plant pathogenic bacteria of the genus Dickeya

Autor: Hugouvieux‐cotte‐pattat, Nicole, Royer, Monique, Gueguen, Erwan, Le Guen, Paul, Süssmuth, Roderich, Reverchon, Sylvie, Cociancich, Stéphane

Publikováno v: Environmental Microbiology
Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2022, ⟨10.1111/1462-2920.15889⟩
Environmental Microbiology, 2022, pp.1467-1483. ⟨10.1111/1462-2920.15889⟩

International audience; The Vfm quorum sensing (QS) system is preponderant for the virulence of different species of the bacterial genus Dickeya. The vfm gene cluster encodes 26 genes involved in the production, sensing or transduction of the QS sign

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::6490408e826ae8212e193e823197fac7
https://hal.archives-ouvertes.fr/hal-03521104

In vitro exploration of the Xanthomonas hortorum pv. vitians genome using transposon insertion sequencing and comparative genomics to discriminate between core and contextual essential genes

Autor: Morinière, Lucas, Lecomte, Solène, Gueguen, Erwan, Bertolla, Franck

Publikováno v: Microbial Genomics
Microbial Genomics, Society for General Microbiology, 2021, ⟨10.1099/mgen.0.000546⟩

International audience; The essential genome of a bacterium encompasses core genes associated with basic cellular processes and conditionally essential genes dependent upon environmental conditions or the genetic context. Comprehensive knowledge of t

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::659bd24777740b5bc7845fdc2c8fd1c0
https://hal.archives-ouvertes.fr/hal-03239487/file/Moriniere_et_al._2021_Microbial_Genomics_Full.pdf