Zobrazeno 1 - 10
of 38
pro vyhledávání: '"Guanghong Zuo"'
Publikováno v:
Frontiers in Molecular Biosciences, Vol 7 (2020)
The transition network provides a key to reveal the thermodynamic and kinetic properties of biomolecular systems. In this paper, we introduce a new method, named effective energy rescaling space trajectory mapping (EspcTM), to detect metastable state
Externí odkaz:
https://doaj.org/article/af0935396b1041df8b2dccfecfdb449f
Publikováno v:
Genomics, Proteomics & Bioinformatics, Vol 16, Iss 5, Pp 310-319 (2018)
We report an important but long-overlooked manifestation of low-resolution power of 16S rRNA sequence analysis at the species level, namely, in 16S rRNA-based phylogenetic trees polyphyletic placements of closely-related species are abundant compared
Externí odkaz:
https://doaj.org/article/87b0778f6588494d821a814adbd2d85a
Autor:
Guanghong Zuo, Bailin Hao
Publikováno v:
Synthetic and Systems Biotechnology, Vol 2, Iss 3, Pp 226-235 (2017)
A monospecific genus contains a single species ever since it was proposed. Though formally more than half of the known prokaryotic genera are monospecific, we pick up those which actually raise taxonomic problems by violating monophyly of the taxon w
Externí odkaz:
https://doaj.org/article/bcea64e2344b4f65a88b2b51ef68653f
Publikováno v:
Genomics, Proteomics & Bioinformatics, Vol 14, Iss 2, Pp 94-102 (2016)
We describe an interactive viewer for the All-Species Living Tree (LVTree). The viewer incorporates treeing and lineage information from the ARB-SILVA website. It allows collapsing the tree branches at different taxonomic ranks and expanding the coll
Externí odkaz:
https://doaj.org/article/41cbff58523e4f3eaf3a9cfd8eece11e
Autor:
Guanghong Zuo, Bailin Hao
Publikováno v:
Genomics, Proteomics & Bioinformatics, Vol 13, Iss 5, Pp 321-331 (2015)
A faithful phylogeny and an objective taxonomy for prokaryotes should agree with each other and ultimately follow the genome data. With the number of sequenced genomes reaching tens of thousands, both tree inference and detailed comparison with taxon
Externí odkaz:
https://doaj.org/article/3dc34581aa5d4ab796e11a98a50b72db
Publikováno v:
Life, Vol 5, Iss 1, Pp 949-968 (2015)
A tripartite comparison of Archaea phylogeny and taxonomy at and above the rank order is reported: (1) the whole-genome-based and alignment-free CVTree using 179 genomes; (2) the 16S rRNA analysis exemplified by the All-Species Living Tree with 366 a
Externí odkaz:
https://doaj.org/article/02a48c50c81a4bf684291eddc3bb3f80
Autor:
Guanghong Zuo
Publikováno v:
Advances in Economics, Management and Political Sciences. 3:572-583
This study attempts to evaluate whether offshore RMB(CNH) is a hedging asset. Current research in this field is few and far between, so the introduction of more data and models would be helpful to enrich relevant studies. We use data that covers the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::16f5e0fdf30a6f29d88a580f1047ec24
https://doi.org/10.54254/2754-1169/3/2022837
https://doi.org/10.54254/2754-1169/3/2022837
Autor:
Guanghong Zuo
Publikováno v:
Genomics, Proteomics & Bioinformatics. 19:662-667
CVTree is an alignment-free algorithm to infer phylogenetic relationships from genome sequences. It had been successfully applied to study phylogeny and taxonomy of viruses, prokaryotes, and fungi based on the whole genomes, as well as chloroplasts,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::947a99eb3ec86c6956725d5776a5c412
https://doi.org/10.1016/j.gpb.2021.03.006
https://doi.org/10.1016/j.gpb.2021.03.006
Autor:
Guanghong Zuo, Bailin Hao
Publikováno v:
SCIENTIA SINICA Vitae. 47:159-170
Microbial genomes and RNA sequences comprise an important part of biological big data. CVTree is a whole-genome based and alignment-free method whereas LVTree is based on alignment of 16S rRNA sequences. They provide two independent ways to construct
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3602727c8970fa2c3cb91249f552986a
https://doi.org/10.1360/n052016-00312
https://doi.org/10.1360/n052016-00312
Autor:
Bailin Hao, Guanghong Zuo
Publikováno v:
Genomics, Proteomics & Bioinformatics
Genomics, Proteomics & Bioinformatics, Vol 13, Iss 5, Pp 321-331 (2015)
Genomics, Proteomics & Bioinformatics, Vol 13, Iss 5, Pp 321-331 (2015)
A faithful phylogeny and an objective taxonomy for prokaryotes should agree with each other and ultimately follow the genome data. With the number of sequenced genomes reaching tens of thousands, both tree inference and detailed comparison with taxon
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::830d95ca4473f930c39a1d3057002e23
http://europepmc.org/articles/PMC4678791
http://europepmc.org/articles/PMC4678791