Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Grigory Sharov"'
Autor:
Pablo Conesa, Yunior C. Fonseca, Jorge Jiménez de la Morena, Grigory Sharov, Jose Miguel de la Rosa-Trevín, Ana Cuervo, Alberto García Mena, Borja Rodríguez de Francisco, Daniel del Hoyo, David Herreros, Daniel Marchan, David Strelak, Estrella Fernández-Giménez, Erney Ramírez-Aportela, Federico Pedro de Isidro-Gómez, Irene Sánchez, James Krieger, José Luis Vilas, Laura del Cano, Marcos Gragera, Mikel Iceta, Marta Martínez, Patricia Losana, Roberto Melero, Roberto Marabini, José María Carazo, Carlos Oscar Sánchez Sorzano
Publikováno v:
Biological Imaging, Vol 3 (2023)
Image-processing pipelines require the design of complex workflows combining many different steps that bring the raw acquired data to a final result with biological meaning. In the image-processing domain of cryo-electron microscopy single-particle a
Externí odkaz:
https://doaj.org/article/7e0c16ca201946a0af77da21601e8521
Autor:
Grigory Sharov, Karine Voltz, Alexandre Durand, Olga Kolesnikova, Gabor Papai, Alexander G. Myasnikov, Annick Dejaegere, Adam Ben Shem, Patrick Schultz
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-7 (2017)
The transcription co-activator complex SAGA is recruited to promoters by transcriptional activators and promotes the formation of the pre-initiation complex. Here, the authors present the cryo-EM structure of the SAGA complex and resolve the major ta
Externí odkaz:
https://doaj.org/article/9840b937571446d3924b256fc336f3ee
Autor:
James Mark Wagstaff, Vicente José Planelles-Herrero, Grigory Sharov, Aisha Alnami, Frank Kozielski, Emmanuel Derivery, Jan Löwe
SummaryProtein filaments are used in myriads of ways to organise other molecules in space and time within cells. Some filament-forming proteins couple the hydrolysis of nucleotides to their polymerisation cycle, thus powering the directed movement of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8c15d1f9aede9f4ce679bfffbd54c033
https://doi.org/10.1101/2022.09.08.507146
https://doi.org/10.1101/2022.09.08.507146
Publikováno v:
Acta Crystallographica. Section D, Structural Biology
An overview of the Scipion plugin for the RELION software package is presented and various image-processing capabilities within the Scipion framework are discussed.
Scipion is a modular image-processing framework that integrates several software
Scipion is a modular image-processing framework that integrates several software
Publikováno v:
Biochemical Journal
1AbstractWe describe new tools for the processing of electron cryo-microscopy (cryo-EM) images in the fourth major release of the RELION software. In particular, we introduce VDAM, a Variable-metric gradient Descent algorithm with Adaptive Moments es
Publikováno v:
Methos in Molecular Biology-multiprotein complexes
Methos in Molecular Biology-multiprotein complexes, pp.243-256, 2020
Multiprotein Complexes. Methods and Protocols
Arnaud Poterszman. Multiprotein Complexes. Methods and Protocols, 2247, Springer, pp.243-256, 2021, Methods in Molecular Biology, 978-1-0716-1125-8. ⟨10.1007/978-1-0716-1126-5_13⟩
Methods in Molecular Biology ISBN: 9781071611258
Methos in Molecular Biology-multiprotein complexes, pp.243-256, 2020
Multiprotein Complexes. Methods and Protocols
Arnaud Poterszman. Multiprotein Complexes. Methods and Protocols, 2247, Springer, pp.243-256, 2021, Methods in Molecular Biology, 978-1-0716-1125-8. ⟨10.1007/978-1-0716-1126-5_13⟩
Methods in Molecular Biology ISBN: 9781071611258
International audience; Electron microscopy is a powerful tool for studying the homogeneity and structure of biomolecular complexes. The small wavelength of electron and the availability of electron optics enable the direct visualization of macromole
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5fd3e9fa3daf8f026dee8c23bf699011
https://hal.archives-ouvertes.fr/hal-03454198/document
https://hal.archives-ouvertes.fr/hal-03454198/document
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2247
Electron microscopy is a powerful tool for studying the homogeneity and structure of biomolecular complexes. The small wavelength of electron and the availability of electron optics enable the direct visualization of macromolecular assemblies in a la
Scipion is a modular image processing framework integrating several software packages under a unified interface while taking care of file formats and conversions. Here new developments and capabilities of the Scipion plugin for the Relion software ar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e7f357ff489c77f19b9bc31c05c6a5fd
https://doi.org/10.1101/2020.12.06.399808
https://doi.org/10.1101/2020.12.06.399808
Flexible workflows for on-the-fly electron-microscopy single-particle image processing using Scipion
Autor:
Y. Rancel, Grigory Sharov, Pablo Conesa, Tomáš Majtner, José María Carazo, L. del Cano, Roberto Marabini, A. Jiménez-Moreno, C.A. García, P. Horvath, Javier Mota, Remedios Melero, Erney Ramírez-Aportela, María Jesús Martínez, Rubén J. Sánchez-García, C.O.S. Sorzano, David Maluenda, Yunior C. Fonseca, David Strelak, José Luis Vilas
Publikováno v:
Acta Crystallographica Section D Structural Biology
Biblos-e Archivo. Repositorio Institucional de la UAM
instname
Acta Crystallographica. Section D, Structural Biology
Digital.CSIC. Repositorio Institucional del CSIC
Biblos-e Archivo. Repositorio Institucional de la UAM
instname
Acta Crystallographica. Section D, Structural Biology
Digital.CSIC. Repositorio Institucional del CSIC
Electron microscopy of macromolecular structures is an approach that is in increasing demand in the field of structural biology. The automation of image acquisition has greatly increased the potential throughput of electron microscopy. Here, the focu
Autor:
Grigory Sharov, Joaquín Otón, J. Gutiérrez, Javier Vargas, Carlos Oscar S. Sorzano, L. del Cano, A. Quintana, Jordi Burguet-Castell, A. Zaldívar, Mohsen Kazemi, J. Navas, Vahid Abrishami, Roberto Marabini, José María Carazo, I. Foche, J. Cuenca-Alba, José Luis Vilas, J.M. de la Rosa-Trevín, P. Conesa, Josué Gómez-Blanco
Publikováno v:
Journal of Structural Biology. 195:93-99
In the past few years, 3D electron microscopy (3DEM) has undergone a revolution in instrumentation and methodology. One of the central players in this wide-reaching change is the continuous development of image processing software. Here we present Sc