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The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report

Autor: Afshinnekoo, Ebrahim, Ahsanuddin, Sofia, Ghedin, Elodie, Read, Timothy, Fraser, Claire, Dudley, Joel, Bowler, Christopher, Mason, Christopher E., Chernomoretz, Ariel, Stolovitzky, Gustavo, Łabaj, Paweł P., Graf, Alexandra B., Darling, Aaron, Burke, Catherine, Noushmehr, Houtan, Dias-Neto, Emmanuel, Guo, Yongli, Xie, Zhi, Lee, Patrick K. H., Shi, Leming, Ruiz-Perez, Carlos A., Zambrano, Maria Mercedes, Siam, Rania, Ouf, Amged, Richard, Hugues, Lafontaine, Ingrid, Wieler, Lothar H., Semmler, Torsten, Prithiviraj, Bharath, Nedunuri, Narasimha, Mehr, Shaadi, Banihashemi, Kambiz, Lista, Florigio, Anselmo, Anna, Suzuki, Haruo, Kuroda, Makoto, Yamashita, Riu, Sato, Yukoto, Kaminuma, Eli, Aranda, Celia M. Alpuche, Martinez, Jesus, Dada, Christopher, Dybwad, Marius, Oliveira, Manuela, Schuster, Stephan, Siwo, Geoffrey H., Jang, Soojin, Seo, Sung Chul, Hwang, Sung Ho, Ossowski, Stephan, Bezdan, Daniela, Chaker, Salama, Chatziefthimiou, Aspassia D., Udekwu, Klas, Liungdahl, Per, Sezerman, Ugur, Meydan, Cem, Elhaik, Eran, Gonnet, Gaston, Schriml, Lynn M., Mongodin, Emmanuel, Huttenhower, Curtis, Gilbert, Jack, Eisen, Jonathan, Hirschberg, David, Hernandez, Mark, McGrath, Ken, McGrath, Leanne, Gray, Andrew, Osuolale, Olayinka, Segata, Nicola, Fillo, Silvia, Iraola, Gregorio, Zhou, Yiming, Chang, Yujun, Li, Yang, Zhend, Yuanting, Hou, Wanwan, Ramirez, Adan, Cepeda, Martha, Desnues, Christelle, Rascovan, Nicolas, Baron, Colin, Nagarajan, Niranjan, Ercolini, Danilo, Menary, Wayne, Tighe, Scott, Donia, Mohamed, Levy, Shawn, Benito, Joseph, Jones, Angela, Kasarskis, Andrew, Maritz, Julia, Jorgensen, Ellen, Neches, Russell, Livelli, Tom, Barnetche, Jesus Martinez, Pasolli, Edoardo, Greenfield, Nick, Hasan, Nur, Brownstein, John, Nozick, Linda, Michels, Harold, Schriml, Lynn, Brownstein, Catherine, Garbarino, Jeanne, Lyons, Abby, Zhu, Jeff

Publikováno v: Microbiome
Microbiome, 2016, 4, pp.24. ⟨10.1186/s40168-016-0168-z⟩
Microbiome, BioMed Central, 2016, 4, pp.24. ⟨10.1186/s40168-016-0168-z⟩
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP

International audience; The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium is a novel, interdisciplinary initiative comprised of experts across many fields, including genomics, data analysis, engineerin

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6034d2e3800467c62328f12baf400cd6
https://hal.science/hal-01528508

Additional file 3: of Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

Autor: McIntyre, Alexa, Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert, HĂŠnaff, Elizabeth, Alexander, Noah, Minot, Samuel, Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur, Poorani Subramanian, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita, Rosen, Gail, Mason, Christopher

Supplementary figures. (PDF 496 kb)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b567b1708a19b295a7f71636242a8f28

Assessment of REPLI-g Multiple Displacement Whole Genome Amplification (WGA) Techniques for Metagenomic Applications.

Autor: Ahsanuddin, Sofia, Afshinnekoo, Ebrahim, Gandara, Jorge, Hakyemezoğlu, Mustafa, Bezdan, Daniela, Minot, Samuel, Greenfield, Nick, Mason, Christopher E.

Publikováno v: Journal of Biomolecular Techniques; Apr2017, Vol. 28 Issue 1, p46-55, 10p

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