Výsledky vyhledávání - "Goudey, Sophie"

Additional file 12 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Autor: Quang, Nam Nguyen, Goudey, Sophie, Ségéral, Emmanuel, Ammara Mohammad, Lemoine, Sophie, Blugeon, Corinne, Versapuech, Margaux, Jean-Christophe Paillart, Berlioz-Torrent, Clarisse, Emiliani, Stéphane, Gallois-Montbrun, Sarah

Additional file 12: Figure S7. Correlation of viral isoform abundances quantified by ONT sequencing between biological replicates of HeLa cells expressing either wild-type or U1 D2upEx snRNA. Relative abundances of HIV-1 spliced RNAs were calculated

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Additional file 5 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Additional file 5: Figure S1. Viral isoform levels in different models of HIV-1 expressing cells. (a) Exon combinations identified by ONT sequencing in infected T cells (INF T cells), transfected (TF HeLa) or infected (INF HeLa) HeLa cells. (b) Exon

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Additional file 8 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Additional file 8: Figure S3. Estimation of the relative abundance of HIV-1 mRNA size classes using ONT sequencing. (a) Schematic representation of HIV-1 unspliced (US, 9-kb), incompletely spliced (IS, 4-kb) and multiply-spliced (MS, 2-kb) classes of

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Additional file 6 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Additional file 6: Figure S2. Identification of new and rare transcripts involving SS D1c, D4a, A1b, A5a and A5c and LTR2 RNA in HIV-1 infected T cell samples. (a) IGV screenshots of ONT read alignments of new and rare transcripts described in the Ad

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Additional file 9 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Additional file 9: Figure S4. Correlation of viral isoform abundances quantified by ONT sequencing between T cell replicates. The relative abundances of HIV-1 spliced RNAs were calculated as a % of the total number of spliced viral RNAs. Results were

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Akademický článek

Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection.

Autor: Nguyen Quang, Nam¹ (AUTHOR), Goudey, Sophie¹ (AUTHOR), Ségéral, Emmanuel¹ (AUTHOR), Mohammad, Ammara² (AUTHOR), Lemoine, Sophie² (AUTHOR), Blugeon, Corinne² (AUTHOR), Versapuech, Margaux¹ (AUTHOR), Paillart, Jean-Christophe³ (AUTHOR), Berlioz-Torrent, Clarisse¹ (AUTHOR), Emiliani, Stéphane¹ (AUTHOR) stephane.emiliani@inserm.fr, Gallois-Montbrun, Sarah¹ (AUTHOR) sarah.gallois-montbrun@inserm.fr

Publikováno v: Retrovirology. 8/17/2020, Vol. 17 Issue 1, pN.PAG-N.PAG. 1p.

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