Natural proteome diversity links aneuploidy tolerance to protein turnover.

Autor: Muenzner J; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Trébulle P; Molecular Biology of Metabolism Laboratory, Francis Crick Institute, London, UK.; Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Agostini F; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Zauber H; Max Delbrück Center for Molecular Medicine, Berlin, Germany., Messner CB; Molecular Biology of Metabolism Laboratory, Francis Crick Institute, London, UK.; Precision Proteomics Center, Swiss Institute of Allergy and Asthma Research (SIAF), University of Zurich, Davos, Switzerland., Steger M; Evotec (München), Martinsried, Germany.; NEOsphere Biotechnologies, Martinsried, Germany., Kilian C; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Lau K; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Barthel N; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Lehmann A; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany., Textoris-Taube K; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany.; Core Facility High-Throughput Mass Spectrometry, Charité Universitätsmedizin, Berlin, Germany., Caudal E; Université de Strasbourg, CNRS GMGM UMR 7156, Strasbourg, France., Egger AS; Molecular Biology of Metabolism Laboratory, Francis Crick Institute, London, UK., Amari F; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany.; Core Facility High-Throughput Mass Spectrometry, Charité Universitätsmedizin, Berlin, Germany., De Chiara M; Université Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France., Demichev V; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany.; Molecular Biology of Metabolism Laboratory, Francis Crick Institute, London, UK., Gossmann TI; Computational Systems Biology, Faculty of Biochemical and Chemical Engineering, TU Dortmund University, Dortmund, Germany., Mülleder M; Core Facility High-Throughput Mass Spectrometry, Charité Universitätsmedizin, Berlin, Germany., Liti G; Université Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France., Schacherer J; Université de Strasbourg, CNRS GMGM UMR 7156, Strasbourg, France.; Institut Universitaire de France (IUF), Paris, France., Selbach M; Max Delbrück Center for Molecular Medicine, Berlin, Germany., Berman J; Shmunis School of Biomedical and Cancer Research, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Israel. jberman@tauex.tau.ac.il., Ralser M; Department of Biochemistry, Charité Universitätsmedizin, Berlin, Germany. markus.ralser@charite.de.; Molecular Biology of Metabolism Laboratory, Francis Crick Institute, London, UK. markus.ralser@charite.de.; Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK. markus.ralser@charite.de.; Max Planck Institute for Molecular Genetics, Berlin, Germany. markus.ralser@charite.de.

Publikováno v: Nature [Nature] 2024 Jun; Vol. 630 (8015), pp. 149-157. Date of Electronic Publication: 2024 May 22.

High Nucleotide Diversity Accompanies Differential DNA Methylation in Naturally Diverging Populations.

Autor: Ord J; Institute for Fish and Wildlife Health, University of Bern, Bern, Switzerland.; Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland., Gossmann TI; Computational Systems Biology, Faculty of Biochemical and Chemical Engineering, TU Dortmund University, Dortmund, Germany., Adrian-Kalchhauser I; Institute for Fish and Wildlife Health, University of Bern, Bern, Switzerland.

Publikováno v: Molecular biology and evolution [Mol Biol Evol] 2023 Apr 04; Vol. 40 (4).

Signatures of Selection on Mitonuclear Integrated Genes Uncover Hidden Mitogenomic Variation in Fur Seals.

Autor: Vendrami DLJ; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany., Gossmann TI; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany., Chakarov N; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany., Paijmans AJ; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany., Litzke V; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany., Eyre-Walker A; School of Life Science, University of Sussex, Brighton BN1 9QG, UK., Forcada J; British Antarctic Survey, High Cross, Madingley Road, Cambridge CB3 OET, UK., Hoffman JI; Department of Animal Behaviour, Bielefeld University, 33501 Bielefeld, Germany.; British Antarctic Survey, High Cross, Madingley Road, Cambridge CB3 OET, UK.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2022 Jul 02; Vol. 14 (7).

Dispersal strategies shape persistence and evolution of human gut bacteria.

Autor: Hildebrand F; Gut Microbes and Health, Quadram Institute Bioscience, NR4 7UQ Norwich, UK; Digital Biology, Earlham Institute, NR4 7UZ Norwich, UK; European Molecular Biology Laboratory, Structural and Computational Biology Unit, 69117 Heidelberg, Germany. Electronic address: falk.hildebrand@quadram.ac.uk., Gossmann TI; Department of Animal Behaviour, Bielefeld University, Bielefeld DE-33501, Germany., Frioux C; Gut Microbes and Health, Quadram Institute Bioscience, NR4 7UQ Norwich, UK; Inria, INRAE, CNRS, Univ. Bordeaux, 33405 Talence, France., Özkurt E; Gut Microbes and Health, Quadram Institute Bioscience, NR4 7UQ Norwich, UK; Digital Biology, Earlham Institute, NR4 7UZ Norwich, UK., Myers PN; Clinical Microbiomics A/S, Copenhagen, Denmark; Department of Biotechnology and Biomedicine, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark., Ferretti P; European Molecular Biology Laboratory, Structural and Computational Biology Unit, 69117 Heidelberg, Germany., Kuhn M; European Molecular Biology Laboratory, Structural and Computational Biology Unit, 69117 Heidelberg, Germany., Bahram M; Department of Ecology, Swedish University of Agricultural Sciences, Ulls väg 16, 750 07 Uppsala, Sweden; Institute of Ecology and Earth Sciences, University of Tartu, Vanemuise 46, 51014 Tartu, Estonia., Nielsen HB; Clinical Microbiomics A/S, Copenhagen, Denmark., Bork P; European Molecular Biology Laboratory, Structural and Computational Biology Unit, 69117 Heidelberg, Germany; Max Delbrück Center for Molecular Medicine, Berlin, Germany; Yonsei Frontier Lab (YFL), Yonsei University, Seoul 03722, South Korea; Department of Bioinformatics, Biocenter, University of Würzburg, Würzburg, Germany. Electronic address: bork@embl.de.

Publikováno v: Cell host & microbe [Cell Host Microbe] 2021 Jul 14; Vol. 29 (7), pp. 1167-1176.e9. Date of Electronic Publication: 2021 Jun 09.

Author Correction: Discovery of fungal surface NADases predominantly present in pathogenic species.

Autor: Strømland Ø; Department of Biomedicine, University of Bergen, Bergen, Norway., Kallio JP; Department of Biomedicine, University of Bergen, Bergen, Norway., Pschibul A; Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany., Skoge RH; Department of Biological Sciences, University of Bergen, Bergen, Norway., Harðardóttir HM; Department of Biological Sciences, University of Bergen, Bergen, Norway., Sverkeli LJ; Department of Biomedicine, University of Bergen, Bergen, Norway.; Department of Biological Sciences, University of Bergen, Bergen, Norway., Heinekamp T; Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany., Kniemeyer O; Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany., Migaud M; Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA., Makarov MV; Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA., Gossmann TI; Department of Animal Behaviour, Bielefeld University, Bielefeld, Germany.; Department of Animal and Plant Sciences, University of Sheffield, Sheffield, UK., Brakhage AA; Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute, Jena, Germany.; Institute of Microbiology, Friedrich Schiller University Jena, Jena, Germany., Ziegler M; Department of Biomedicine, University of Bergen, Bergen, Norway. mathias.ziegler@uib.no.

Publikováno v: Nature communications [Nat Commun] 2021 Mar 25; Vol. 12 (1), pp. 2004. Date of Electronic Publication: 2021 Mar 25.