Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Gina V Filloramo"'
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-25 (2021)
Abstract Background The marine diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum are valuable model organisms for exploring the evolution, diversity and ecology of this important algal group. Their reference genomes, published in 2004 an
Externí odkaz:
https://doaj.org/article/959c405dad7842b4a33fa11772ec1c3a
Autor:
Xi Zhang, Yining Hu, Laura Eme, Shinichiro Maruyama, Robert J.M. Eveleigh, Bruce A. Curtis, Shannon J. Sibbald, Julia F. Hopkins, Gina V. Filloramo, Klaas J. van Wijk, John M. Archibald
Publikováno v:
STAR Protocols, Vol 3, Iss 1, Pp 101175- (2022)
Summary: Various bioinformatics protocols have been developed for trimming the number of operational taxonomic units (OTUs) in phylogenetic datasets, but they typically require significant manual intervention. Here we present TreeTuner, a semiautomat
Externí odkaz:
https://doaj.org/article/c1245289dfb04b829337ef7af067e2ff
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract Background The process of gene fusion involves the formation of a single chimeric gene from multiple complete or partial gene sequences. Gene fusion is recognized as an important mechanism by which genes and their protein products can evolve
Externí odkaz:
https://doaj.org/article/8ddbaa8d38a04d8db804ee90026874d6
Autor:
Mariana Rius, Joshua S Rest, Gina V Filloramo, Anna M G Novák Vanclová, John M Archibald, Jackie L Collier
Publikováno v:
Genome Biology and Evolution. 15
Thraustochytrids (phylum: Labyrinthulomycota) are nonphotosynthetic marine protists. Some thraustochytrids have crtIBY, a trifunctional fusion gene encoding a protein capable of β-carotene biosynthesis from geranylgeranyl pyrophosphate. Here we show
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::80992cac76a64857d36ef2c9cb0d5b25
https://doi.org/10.1093/gbe/evad029
https://doi.org/10.1093/gbe/evad029
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
BMC Genomics
BMC Genomics
Background The process of gene fusion involves the formation of a single chimeric gene from multiple complete or partial gene sequences. Gene fusion is recognized as an important mechanism by which genes and their protein products can evolve new func
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fc69e28e125ae745683f212e60d294e2
http://link.springer.com/article/10.1186/s12864-018-5412-4
http://link.springer.com/article/10.1186/s12864-018-5412-4
Publikováno v:
BMC Genomics
BMC Genomics, Vol 22, Iss 1, Pp 1-25 (2021)
BMC Genomics, Vol 22, Iss 1, Pp 1-25 (2021)
Background The marine diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum are valuable model organisms for exploring the evolution, diversity and ecology of this important algal group. Their reference genomes, published in 2004 and 2008, r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e83ba09faa8280bd5dc35946d7035d90
https://doi.org/10.1186/s12864-021-07666-3
https://doi.org/10.1186/s12864-021-07666-3
Autor:
Gary W. Saunders, Gina V. Filloramo
Publikováno v:
Botany. 96:359-383
Molecular-assisted alpha taxonomy using COI-5P and rbcL-3P was employed to reassess species diversity for the Rhodymeniales (Rhodophyta) in British Columbia. A total of 563 collections from British Columbia were resolved as 16 genetic species groups,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a281fb28ecff2d82b2e1f706b831119c
https://doi.org/10.1139/cjb-2017-0143
https://doi.org/10.1139/cjb-2017-0143
Publikováno v:
Phycologia. 56:296-302
Northwestern Pacific specimens of Callophyllis radula, Callophyllis rhynchocarpa, Pterosiphonia bipinnata and Sparlingia pertusa, all with type localities in Far East Russia, were genetically compared to reportedly conspecific populations in the Nort
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::60e790091abf3b6cd2057361c1b21f01
https://doi.org/10.2216/15-145.1
https://doi.org/10.2216/15-145.1
Autor:
Gary W. Saunders, Gina V. Filloramo
Publikováno v:
European Journal of Phycology. 51:354-367
A previously published DNA barcode survey of red macroalgae in Australia revealed significant cryptic and overlooked diversity for the genus Rhodymenia with recognition of R. novahollandica, R. prolificans, R. stenoglossa, R. wilsonis and an addition
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d01af7ece23b286b434554359445e21
https://doi.org/10.1080/09670262.2016.1170886
https://doi.org/10.1080/09670262.2016.1170886
Autor:
Gary W. Saunders, Gina V. Filloramo
Publikováno v:
Phycologia. 54:375-384
Recently collected material from Coffs Harbour, New South Wales, Australia, was identified as the generitype of Leptofauchea, L. nitophylloides. This facilitated a re-examination of Leptofauchea and its constituent species to assess monophyly. Multig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f5ba69f25c5b796bbb6f51d88a699562
https://doi.org/10.2216/14-110.1
https://doi.org/10.2216/14-110.1