Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Gholamali Rahnavard"'
Autor:
Raivo Kolde, Eric A. Franzosa, Gholamali Rahnavard, Andrew Brantley Hall, Hera Vlamakis, Christine Stevens, Mark J. Daly, Ramnik J. Xavier, Curtis Huttenhower
Publikováno v:
Genome Medicine, Vol 10, Iss 1, Pp 1-13 (2018)
Abstract Background Despite the increasing recognition that microbial communities within the human body are linked to health, we have an incomplete understanding of the environmental and molecular interactions that shape the composition of these comm
Externí odkaz:
https://doaj.org/article/9f77dd7d32cc455cb0c8cff2c11a9a8a
Autor:
Daniel McDonald, Embriette Hyde, Justine W. Debelius, James T. Morton, Antonio Gonzalez, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew A. Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kosciolek, Joshua Ladau, Jeff Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, Jose Navas-Molina, Tanya T. Nguyen, Shyamal Peddada, Pavel Pevzner, Katherine S. Pollard, Gholamali Rahnavard, Adam Robbins-Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke R. Thompson, Anupriya Tripathi, Yoshiki Vázquez-Baeza, Alison Vrbanac, Paul Wischmeyer, Elaine Wolfe, Qiyun Zhu, Rob Knight
Publikováno v:
mSystems, Vol 3, Iss 3 (2018)
ABSTRACT Although much work has linked the human microbiome to specific phenotypes and lifestyle variables, data from different projects have been challenging to integrate and the extent of microbial and molecular diversity in human stool remains unk
Externí odkaz:
https://doaj.org/article/0301cbad620f4f3490bc93e225ec5d0c
Autor:
Daniela Börnigen, Yo Sup Moon, Gholamali Rahnavard, Levi Waldron, Lauren McIver, Afrah Shafquat, Eric A. Franzosa, Larissa Miropolsky, Christopher Sweeney, Xochitl C. Morgan, Wendy S. Garrett, Curtis Huttenhower
Publikováno v:
PeerJ, Vol 3, p e791 (2015)
Modern biological research requires rapid, complex, and reproducible integration of multiple experimental results generated both internally and externally (e.g., from public repositories). Although large systematic meta-analyses are among the most ef
Externí odkaz:
https://doaj.org/article/2af1b205feed4303977b54e615be3277
Autor:
Emma Schwager, Sucipto K, Gholamali Rahnavard, George Weingart, Levi Waldron, Yo Sup Moon, Lauren J. McIver, Xochitl C. Morgan, Curtis Huttenhower, Ghazi Ar, Eric A. Franzosa, Jason Lloyd-Price
Modern biological screens yield enormous numbers of measurements, and identifying and interpreting statistically significant associations among features is essential. Here, we present a novel hierarchical framework, HAllA (Hierarchical All-against-Al
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5edbdbebdae2589fc64b24278830214c
https://doi.org/10.1101/2021.11.11.468183
https://doi.org/10.1101/2021.11.11.468183
Autor:
Nadim J. Ajami, Gholamali Rahnavard, Melanie Schirmer, Ashwin N. Ananthakrishnan, Kevin S. Bonham, Lee A. Denson, Clary B. Clish, Kathleen Lake, Yoshiki Vázquez-Baeza, Dermot P.B. McGovern, David Casero, Dmitry Shungin, Jonathan Braun, Antonio Gonzalez, Mahadev Prasad, Thomas G. Graeber, Joseph F. Petrosino, Carol J. Landers, Damian R. Plichta, Hera Vlamakis, Subra Kugathasan, Jenny S. Sauk, Janet K. Jansson, Elizabeth Andrews, Rob Knight, A. Brantley Hall, Harland S. Winter, Richard A. White, Curtis Huttenhower, Himel Mallick, Colin J. Brislawn, Tiffany W. Poon, Holly Courtney, Eric A. Franzosa, Julian Avila-Pacheco, Thaddeus S. Stappenbeck, Jason Lloyd-Price, Ramnik J. Xavier, Cesar Arze
Publikováno v:
Nature
Inflammatory bowel diseases, which include Crohn’s disease and ulcerative colitis, affect several million individuals worldwide. Crohn’s disease and ulcerative colitis are complex diseases that are heterogeneous at the clinical, immunological, mo
Autor:
Gholamali Rahnavard, Hera Vlamakis, Curtis Huttenhower, Mark J. Daly, Raivo Kolde, Ramnik J. Xavier, Christine Stevens, Eric A. Franzosa, Andrew Brantley Hall
Publikováno v:
Genome Medicine, Vol 10, Iss 1, Pp 1-13 (2018)
BioMed Central
Genome Medicine
BioMed Central
Genome Medicine
Background: Despite the increasing recognition that microbial communities within the human body are linked to health, we have an incomplete understanding of the environmental and molecular interactions that shape the composition of these communities.
Autor:
Joshua Orvis, Curtis Huttenhower, Jason Lloyd-Price, Gholamali Rahnavard, Arthur Brady, A. Brantley Hall, Rob Knight, Anup Mahurkar, Heather Huot Creasy, Jonathan Crabtree, Carrie McCracken, Michelle G. Giglio, Daniel McDonald, Eric A. Franzosa, Owen White
Publikováno v:
Nature, vol 550, iss 7674
Nature
Nature
The characterization of baseline microbial and functional diversity in the human microbiome has enabled studies of microbiome-related disease, diversity, biogeography, and molecular function. The National Institutes of Health Human Microbiome Project
Autor:
Gholamali Rahnavard, Damaskini Valvi, P. Weihe, Youssef Oulhote, Himel Mallick, Jason Lloyd-Price, Grandjean P, Curtis Huttenhower
Publikováno v:
Environmental Epidemiology. 3:298-299
Autor:
Joshua Ladau, Philip Hugenholtz, Jessica L. Metcalf, Jessica L. Green, Lingjing Jiang, Qiyun Zhu, Pieter C. Dorrestein, Grant Gogul, Clarisse Marotz, Robert R. Dunn, Varykina G. Thackray, Pavel A. Pevzner, Alison Vrbanac, Embriette R. Hyde, Katherine S. Pollard, Yoshiki Vázquez-Baeza, Justine W. Debelius, Jose A. Navas-Molina, Alexander A. Aksenov, Lindsay DeRight Goldasich, Dmitry Meleshko, Paul E. Wischmeyer, Yingfeng Chen, Hosein Mohimani, Naseer Sangwan, Gholamali Rahnavard, Caitriona Brennan, Daniel McDonald, Tomasz Kosciolek, Scott T. Kelley, Bahar Behsaz, Matthew A. Jackson, Tanya T. Nguyen, Se Jin Song, Tim D. Spector, James Gaffney, Anupriya Tripathi, Elaine Wolfe, Alexey V. Melnik, Jeff Leach, Dilip V. Jeste, Luke R. Thompson, Larry Smarr, Adam Robbins-Pianka, Joshua Shorenstein, Jack A. Gilbert, Dan Knights, Emmanuel Montassier, James T. Morton, Shyamal D. Peddada, Antonio Gonzalez, Ashkaan K. Fahimipour, Austin D. Swafford, Rob Knight, Stefan Janssen, Curtis Huttenhower, Gail Ackermann, Greg Humphrey
Although much work has linked the human microbiome to specific phenotypes and lifestyle variables, data from different projects have been challenging to integrate and the extent of microbial and molecular diversity in human stool remains unknown. Usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b467e6fef6d6ba36b90ac16f6e6144a3
https://doi.org/10.1101/277970
https://doi.org/10.1101/277970
Autor:
Lauren J. McIver, George Weingart, Melanie Schirmer, Karen Schwarzberg Lipson, Rob Knight, J. Gregory Caporaso, Eric A. Franzosa, Luke R. Thompson, Gholamali Rahnavard, Nicola Segata, Curtis Huttenhower
Publikováno v:
Nature methods, vol 15, iss 11
Nature methods
Nature methods
Functional profiling from metagenomic or metatranscriptomic (“meta’omic”) sequencing provides insight into the molecular activities of microbial communities. These analyses are typically carried out using comprehensive search of sequencing read
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::91f898cac9bc3cd04fce8342460a9b34
http://www.nature.com/nmeth/
http://www.nature.com/nmeth/