Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Gerhard Körting"'
Publikováno v:
Journal of Proteomics & Bioinformatics. :485-507
With the large variety of Proteomics workflows, as well as the large variety of instruments and data-analysis software available, researchers today face major challenges validating and comparing their Proteomics data. It is the expectation that Human
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4b88d8da42b6a539a7a8872497775969
https://doi.org/10.4172/jpb.1000056
https://doi.org/10.4172/jpb.1000056
Publikováno v:
PROTEOMICS. 4:619-628
In this work, the commonly used algorithms for mass spectrometry based protein identification, Mascot, MS-Fit, ProFound and SEQUEST, were studied in respect to the selectivity and sensitivity of their searches. The influence of various search paramet
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c360f58964ec2de1d3eafc0a45cfc74e
https://doi.org/10.1002/pmic.200300612
https://doi.org/10.1002/pmic.200300612
Autor:
Daniel Chamrad, Michael Müller, Katrin Marcus, Lennart Martens, Christian Stephan, Michael Hamacher, Henning Hermjakob, Martin Blüggel, Rolf Apweiler, Gerhard Körting, Helmut E. Meyer, Andrew W. Dowsey, David Parkinson, Kai A. Reidegeld, Michael J. Dunn
Publikováno v:
PROTEOMICS. 6:1719-1721
The Bioinformatics Committee of the HUPO Brain Proteome Project (HUPO BPP) meets regularly to execute the post-lab analyses of the data produced in the HUPO BPP pilot studies. On January 9-11, 2006 the members as well as invited analysts came togethe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a61e198c2de33d7af727e68f02b09ed0
https://doi.org/10.1002/pmic.200600069
https://doi.org/10.1002/pmic.200600069
Autor:
Gerhard Körting, Lennart Martens, Pierre-Alain Binz, Herbert Thiele, Rolf Apweiler, Heike Schäfer, Helmut E. Meyer, Christiane Lohaus, Daniel Chamrad, Michael Müller, Christian Scheer, Michael Hamacher, Philip Jones, Martin Blüggel, Kai A. Reidegeld, David Parkinson, Katrin Marcus, Kevin Auyeung, Chris F. Taylor, Christian Stephan
Publikováno v:
PROTEOMICS. 5:3560-3562
The Bioinformatics Committee of the HUPO Brain Proteome Project (HUPO BPP) meets regularly to execute the post-lab analyses of the data produced in the HUPO BPP pilot studies. On July 7, 2005 the members came together for the 5th time at the European
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::90b2997e4e159b3ece3ae69fea5868e1
https://doi.org/10.1002/pmic.200500580
https://doi.org/10.1002/pmic.200500580
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 696
Within this chapter, various techniques and instructions for characterizing primary structure of proteins are presented, whereas the focus lies on obtaining as much complete sequence information of single proteins as possible. Especially, in the area
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::91eeacb5b37e13cae84d82091b54d6b6
https://pubmed.ncbi.nlm.nih.gov/21063939
https://pubmed.ncbi.nlm.nih.gov/21063939
Publikováno v:
Methods in Molecular Biology ISBN: 9781607619864
Within this chapter, various techniques and instructions for characterizing primary structure of proteins are presented, whereas the focus lies on obtaining as much complete sequence information of single proteins as possible. Especially, in the area
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::904998f8dafffe10d7f6b56fb93d158e
https://doi.org/10.1007/978-1-60761-987-1_2
https://doi.org/10.1007/978-1-60761-987-1_2
Autor:
Michael Kohl, Martin Eisenacher, Gerhard Körting, Martin Blüggel, Helmut E. Meyer, Kai A. Reidegeld, Christian Stephan, Daniel Chamrad
Publikováno v:
Proteomics. 8(6)
One of the major challenges for large scale proteomics research is the quality evaluation of results. Protein identification from complex biological samples or experimental setups is often a manual and subjective task which lacks profound statistical
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7864349a523630e9f39fd80d6e93c477
https://pubmed.ncbi.nlm.nih.gov/18338823
https://pubmed.ncbi.nlm.nih.gov/18338823
Autor:
Rolf Apweiler, Kai A. Reidegeld, Martin Blüggel, Lennart Martens, Chris F. Taylor, David Parkinson, Christian Stephan, Gerhard Körting, Helmut E. Meyer, Andrew Lyall, Pierre-Alain Binz, Daniel Chamrad, Katrin Marcus, Michael Hamacher, André van Hall, Herbert Thiele, Michael Müller, Philip Jones
Publikováno v:
Proteomics. 6(18)
The newly available techniques for sensitive proteome analysis and the resulting amount of data require a new bioinformatics focus on automatic methods for spectrum reprocessing and peptide/protein validation. Manual validation of results in such stu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1696bdd77aa4881ada20e6509b969218
https://pubmed.ncbi.nlm.nih.gov/16927432
https://pubmed.ncbi.nlm.nih.gov/16927432
Autor:
Helmut E. Meyer, Herbert Thiele, Daniel Chamrad, Gerhard Körting, Heike Schäfer, Rolf Apweiler, Martin Blüggel, Christian Stephan, Katrin Marcus
Publikováno v:
Proteomics. 6(18)
A novel software tool named PTM-Explorer has been applied to LC-MS/MS datasets acquired within the Human Proteome Organisation (HUPO) Brain Proteome Project (BPP). PTM-Explorer enables automatic identification of peptide MS/MS spectra that were not e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1c6d0071e14877f8c0d033547c66fe9
https://pubmed.ncbi.nlm.nih.gov/16912973
https://pubmed.ncbi.nlm.nih.gov/16912973
Autor:
Katrin Marcus, Rolf Apweiler, Kai A. Reidegeld, Michael Mueller, Lennart Martens, Christian Stephan, Michael Hamacher, Martin Blüggel, Helmut E. Meyer, Gerhard Körting, Daniel Chamrad, Christian Scheer
Publikováno v:
Proteomics. 6(18)
The HUPO Brain Proteome Project is an initiative coordinating proteomics studies to characterise human and mouse brain proteomes. Proteins identified in human brain samples during the project's pilot phase were put into biological context through int
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1ed63a0ee28d325f74d94bea2b3353bc
https://pubmed.ncbi.nlm.nih.gov/16912974
https://pubmed.ncbi.nlm.nih.gov/16912974