Zobrazeno 1 - 10 of 11 pro vyhledávání: '"Gerdine F. O. Sanson"'
1
Akademický článek
Changes in G+C content of a neutrally evolving gene under a non-reversible dynamics measured by computer simulations based on experimental evolution data
Autor: Adriana Brunstein, Leonardo Varuzza, Gerdine F. O. Sanson, Marcelo R. S. Briones
Publikováno v: Genetics and Molecular Biology, Vol 27, Iss 4, Pp 632-636 (2004)
To evaluate the effects of non-reversibility on compositional base changes and the distribution of branch lengths along a phylogeny, we extended, by means of computer simulations, our previous sequential PCR in vitro evolution experiment. In that stu
Externí odkaz: https://doaj.org/article/3980b45188f040b9b245c85820b3e803
Zobrazit plný text záznamu
2
Experimental Phylogeny of Neutrally Evolving DNA Sequences Generated by a Bifurcate Series of Nested Polymerase Chain Reactions
Autor: Silvia Y. Kawashita, Marcelo R. S. Briones, Adriana Brunstein, Gerdine F. O. Sanson
Publikováno v: Molecular Biology and Evolution. 19:170-178
A known phylogeny was generated using a four-step serial bifurcate PCR method. The ancestor sequence (SSU rDNA) evolved in vitro for 280 nested PCR cycles, and the resulting 15 ancestor and 16 terminal sequences (2,238 bp each) were determined. Parsi
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::409a2ae0ae3ddc33f9d4a690c718dad1
https://doi.org/10.1093/oxfordjournals.molbev.a004069
Zobrazit plný text záznamu
3
Ménage à trois: an evolutionary interplay between human papillomavirus, a tumor, and a woman
Autor: Natalia Shulzhenko, Heidi Lyng, Andrey Morgun, Gerdine F. O. Sanson
Publikováno v: Trends in microbiology. 22(6)
Cervical cancer is the third most common cancer in women with human papillomavirus (HPV) being a key etiologic factor of this devastating disease. In this article, we describe modern advances in the genomics and transcriptomics of cervical cancer tha
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d892a6529cf749cc7b10ce3f0cb4c079
https://pubmed.ncbi.nlm.nih.gov/24674660
Zobrazit plný text záznamu
4
Typing of Candida glabrata in Clinical Isolates by Comparative Sequence Analysis of the Cytochrome c Oxidase Subunit 2 Gene Distinguishes Two Clusters of Strains Associated with Geographical Sequence Polymorphisms
Autor: Gerdine F. O. Sanson, Marcelo R. S. Briones
Publikováno v: Journal of Clinical Microbiology. 38:227-235
We tested whether comparative sequence analysis of the mitochondrion-encoded cytochrome c oxidase subunit 2 gene ( COX2 ) could be used to distinguish intraspecific variants of Candida glabrata . Mitochondrial genes are suitable for investigation of
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::2852c0cd49eec6c4b9bcd276e0017617
https://doi.org/10.1128/jcm.38.1.227-235.2000
Zobrazit plný text záznamu
5
Gene network reconstruction reveals cell cycle and antiviral genes as major drivers of cervical cancer
Autor: Andrey Morgun, Sylvia Michelina Fernandes Brenna, Ismael Dale Cotrim Guerreiro da Silva, Natalia Shulzhenko, Karina L. Mine, Tao Deng, Heidi Lyng, Natalia Volfovsky, Anatoly Yambartsev, Maria Gerbase-DeLima, Malin Lando, Sudhir Varma, Julisa Chamorro Lascasas Ribalta, Gerdine F. O. Sanson, Michael Bustin, Jeff Skinner, Carmen Carvalho, Polly Matzinger, Mark Rochman
Publikováno v: Nature communications
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Although human papillomavirus was identified as an aetiological factor in cervical cancer, the key human gene drivers of this disease remain unknown. Here we apply an unbiased approach integrating gene expression and chromosomal aberration data. In a
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::34ab6163fd05c20e103fb10a3a0653a7
https://pubmed.ncbi.nlm.nih.gov/23651994
Zobrazit plný text záznamu
6
Molecular Profiling Improves Diagnoses of Rejection and Infection in Transplanted Organs
Autor: Ainhoa Perez-Diez, Andrey Morgun, Rosiane V.Z. Diniz, Maria Gerbase-DeLima, Gerdine F. O. Sanson, Natalia Shulzhenko, Polly Matzinger, Dirceu R. Almeida
Publikováno v: Circulation Research. 98
The monitoring of transplanted hearts is currently based on histological evaluation of endomyocardial biopsies, a method that is fairly insensitive and that does not always accurately discriminate between rejection and infection in the heart. Accurat
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::88976ac36129429111e50f8df2cddd23
https://doi.org/10.1161/01.res.0000228714.15691.8a
Zobrazit plný text záznamu
7
Fungi evolution revisited: application of the penalized likelihood method to a Bayesian fungal phylogeny provides a new perspective on phylogenetic relationships and divergence dates of Ascomycota groups
Autor: Adriana Brunstein, Ana Carolina Barbosa Padovan, Marcelo R. S. Briones, Gerdine F. O. Sanson
Publikováno v: Journal of molecular evolution. 60(6)
The depiction of evolutionary relationships within phylum Ascomycota is still controversial because of unresolved branching orders in the radiation of major taxa. Here we generated a dataset of 166 small subunit (18S) rDNA sequences, representative o
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fecd0e32b6537d92d4ef6fcc3d3472fb
https://pubmed.ncbi.nlm.nih.gov/15909224
Zobrazit plný text záznamu
8
Changes in G+C content of a neutrally evolving gene under a non-reversible dynamics measured by computer simulations based on experimental evolution data
Autor: Marcelo R. S. Briones, Leonardo Varuzza, Adriana Brunstein, Gerdine F. O. Sanson
Publikováno v: Genetics and Molecular Biology v.27 n.4 2004
Genetics and Molecular Biology
Sociedade Brasileira de Genética (SBG)
instacron:SBG
Genetics and Molecular Biology, Volume: 27, Issue: 4, Pages: 632-636, Published: 2004
Genetics and Molecular Biology, Vol 27, Iss 4, Pp 632-636 (2004)
To evaluate the effects of non-reversibility on compositional base changes and the distribution of branch lengths along a phylogeny, we extended, by means of computer simulations, our previous sequential PCR in vitro evolution experiment. In that stu
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3377be0982c3db26b256fb11133f00b1
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572004000400026
Zobrazit plný text záznamu
9
Maximum-likelihood divergence date estimates based on rRNA gene sequences suggest two scenarios of Trypanosoma cruzi intraspecific evolution
Autor: Gerdine F. O. Sanson, Octavio Fernandes, Bianca Zingales, Silvia Y. Kawashita, Marcelo R.S. Briones
Publikováno v: Molecular biology and evolution. 18(12)
The phylogenetic relationships of Trypanosoma cruzi strains were inferred using maximum-likelihood from complete 18S rDNA sequences and D7-24Salpha rDNA regions from 20 representative strains of T. cruzi. For this we sequenced the 18S rDNA of 14 stra
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d174fa873e2796d4b5153d9ea0fb0d9
https://pubmed.ncbi.nlm.nih.gov/11719574
Zobrazit plný text záznamu
10
Early Prediction of Acute Gvhd Based on Molecular Profiling at the Time of Engraftment after Hematopoietic Stem Cell Transplantation
Autor: José Salvador Rodrigues de Oliveira, Gerdine F. O. Sanson, Adriano de Moraes Arantes, Andrey Morgun, Amador Gonçalves Primo, Natalia Shulzhenko, Maria Gerbase DeLima
Publikováno v: Blood. 112:2233-2233
Allogeneic hematopoietic stem cell transplantation is an important last resort therapy for hematological diseases. Unfortunately, the success of a large proportion of these transplants is limited by graft-versus-host disease (GVHD). Currently known r
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::1eb2c812e2f2a816af4e0bd4e4a40dfb
https://doi.org/10.1182/blood.v112.11.2233.2233
Zobrazit plný text záznamu

Vyhledávací nástroje:

Upřesnit hledání

Omezení vyhledávání
Plný text Recenzováno Digitální knihovna AV ČR
Zdroje