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Multi-omics of NET formation and correlations with CNDP1, PSPB, and L-cystine levels in severe and mild COVID-19 infections.

Autor: Bramer LM; Pacific Northwest National Laboratory, Richland, WA, USA., Hontz RD; U.S. Naval Medical Research Unit No. TWO (NAMRU-2), Singapore, Singapore., Eisfeld AJ; Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI, USA., Sims AC; Pacific Northwest National Laboratory, Richland, WA, USA., Kim YM; Pacific Northwest National Laboratory, Richland, WA, USA., Stratton KG; Pacific Northwest National Laboratory, Richland, WA, USA., Nicora CD; Pacific Northwest National Laboratory, Richland, WA, USA., Gritsenko MA; Pacific Northwest National Laboratory, Richland, WA, USA., Schepmoes AA; Pacific Northwest National Laboratory, Richland, WA, USA., Akasaka O; Emergency Medical Center, Fujisawa City Hospital 2-6-1 Fujisawa, Fujisawa, Japan., Koga M; Division of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo, Tokyo, Japan., Tsutsumi T; Division of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo, Tokyo, Japan., Nakamura M; Department of Pulmonary Medicine, Tokyo Saiseikai Central, Tokyo, Japan., Nakachi I; Pulmonary Division, Department of Internal Medicine, Utsunomiya Hospital, Utsunomiya, Japan., Baba R; Pulmonary Division, Department of Internal Medicine, Utsunomiya Hospital, Utsunomiya, Japan., Tateno H; Department of Pulmonary Medicine, Saitama City Hospital, Saitama, Japan., Suzuki S; Department of Pulmonary Medicine, Saitama City Hospital, Saitama, Japan., Nakajima H; Department of Hematology and Clinical Immunology, University School of Medicine, Yokohama, Japan., Kato H; Department of Hematology and Clinical Immunology, University School of Medicine, Yokohama, Japan., Ishida K; Kobe Kaisei Hospital, Kobe, Japan., Ishii M; Division of Pulmonary Medicine, Department of Medicine, Keio University School of Medicine, Tokyo, Japan., Uwamino Y; Department of Laboratory Medicine, Keio University School of Medicine, Tokyo, Japan., Mitamura K; Division of Infection Control, Eiju General Hospital, Tokyo, Japan., Paurus VL; Pacific Northwest National Laboratory, Richland, WA, USA., Nakayasu ES; Pacific Northwest National Laboratory, Richland, WA, USA., Attah IK; Pacific Northwest National Laboratory, Richland, WA, USA., Letizia AG; U.S. Naval Medical Research Unit No. TWO (NAMRU-2), Singapore, Singapore., Waters KM; Pacific Northwest National Laboratory, Richland, WA, USA., Metz TO; Pacific Northwest National Laboratory, Richland, WA, USA., Corson K; U.S. Naval Medical Research Unit No. TWO (NAMRU-2), Singapore, Singapore., Kawaoka Y; Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI, USA.; Department of Microbiology and Immunology, Japan.; International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo, Japan., Gerbasi VR; Pacific Northwest National Laboratory, Richland, WA, USA., Yotsuyanagi H; Division of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo., Iwatsuki-Horimoto K; Division of Virology, Institute of Medical Science, University of Tokyo, Japan.

Publikováno v: Heliyon [Heliyon] 2023 Mar; Vol. 9 (3), pp. e13795. Date of Electronic Publication: 2023 Mar 07.

The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells.

Autor: Melani RD; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Gerbasi VR; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Anderson LC; National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL, USA., Sikora JW; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Toby TK; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Hutton JE; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Butcher DS; National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL, USA., Negrão F; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Seckler HS; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Srzentić K; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Fornelli L; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Camarillo JM; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., LeDuc RD; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Cesnik AJ; Department of Genetics, Stanford University, Stanford, CA, USA.; Science for Life Laboratory, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH-Royal Institute of Technology, Stockholm, Sweden., Lundberg E; Department of Genetics, Stanford University, Stanford, CA, USA.; Science for Life Laboratory, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH-Royal Institute of Technology, Stockholm, Sweden., Greer JB; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Fellers RT; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Robey MT; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., DeHart CJ; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Forte E; Proteomics Center of Excellence, Northwestern University, Evanston, IL, USA.; Department of Surgery, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA., Hendrickson CL; National High Magnetic Field Laboratory, Florida State University, Tallahassee, FL, USA., Abbatiello SE; Thermo Fisher Scientific, Cambridge, MA, USA., Thomas PM; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA., Kokaji AI; STEMCELL Technologies Inc., Vancouver, BC, Canada., Levitsky J; Comprehensive Transplant Center, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA., Kelleher NL; Department of Molecular Biosciences, Department of Chemistry, and the Feinberg School of Medicine, Northwestern University, Evanston, IL, USA.; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.

Publikováno v: Science (New York, N.Y.) [Science] 2022 Jan 28; Vol. 375 (6579), pp. 411-418. Date of Electronic Publication: 2022 Jan 27.

Targeted Identification of Protein Interactions in Eukaryotic mRNA Translation.

Autor: Link AJ; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.; Department of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.; Department of Chemistry, Vanderbilt University, Nashville, TN, 37232, USA., Niu X; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Weaver CM; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Jennings JL; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Duncan DT; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., McAfee KJ; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Sammons M; Department of Biological Sciences, Vanderbilt University, Nashville, TN, 37232, USA., Gerbasi VR; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Farley AR; Department of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA., Fleischer TC; Department of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA., Browne CM; Department of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA., Samir P; Department of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA., Galassie A; Department of Chemistry, Vanderbilt University, Nashville, TN, 37232, USA., Boone B; Department of Bioinformatics, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.

Publikováno v: Proteomics [Proteomics] 2020 Apr; Vol. 20 (7), pp. e1900177. Date of Electronic Publication: 2020 Mar 03.

A Highly Productive, One-Pot Cell-Free Protein Synthesis Platform Based on Genomically Recoded Escherichia coli.

Autor: Des Soye BJ; Interdisciplinary Biological Sciences Program, Northwestern University, Evanston, IL 60208, USA; Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA; Center for Synthetic Biology, Northwestern University, Evanston, IL 60208, USA., Gerbasi VR; Proteomics Center of Excellence, Northwestern University, Evanston, IL 60208, USA., Thomas PM; Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA; Proteomics Center of Excellence, Northwestern University, Evanston, IL 60208, USA; Department of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA., Kelleher NL; Interdisciplinary Biological Sciences Program, Northwestern University, Evanston, IL 60208, USA; Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA; Proteomics Center of Excellence, Northwestern University, Evanston, IL 60208, USA; Department of Chemistry, Northwestern University, Evanston, IL 60208, USA; Department of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA; Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL 60611, USA., Jewett MC; Interdisciplinary Biological Sciences Program, Northwestern University, Evanston, IL 60208, USA; Chemistry of Life Processes Institute, Northwestern University, Evanston, IL 60208, USA; Center for Synthetic Biology, Northwestern University, Evanston, IL 60208, USA; Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208, USA; Robert H. Lurie Comprehensive Cancer Center, Northwestern University, Chicago, IL 60611, USA; Simpson Querrey Institute, Northwestern University, Chicago, IL 60611, USA. Electronic address: m-jewett@northwestern.edu.

Publikováno v: Cell chemical biology [Cell Chem Biol] 2019 Dec 19; Vol. 26 (12), pp. 1743-1754.e9. Date of Electronic Publication: 2019 Nov 06.