A history of the MetaSUB consortium: Tracking urban microbes around the globe

Autor: Krista A. Ryon, Braden T. Tierney, Alina Frolova, Andre Kahles, Christelle Desnues, Christos Ouzounis, Cynthis Gibas, Daniela Bezdan, Youping Deng, Ding He, Emmanuel Dias-Neto, Eran Elhaik, Evan Afshin, George Grills, Gregorio Iraola, Haruo Suzuki, Johannes Werner, Klas Udekwu, Lynn Schriml, Malay Bhattacharyya, Manuela Oliveira, Maria Mercedes Zambrano, Nur Hazlin Hazrin-Chong, Olayinka Osuolale, Paweł P. Łabaj, Prisca Tiasse, Sampath Rapuri, Silvia Borras, Sofya Pozdniakova, Tieliu Shi, Ugur Sezerman, Xavier Rodo, Zehra Hazal Sezer, Christopher E. Mason

Publikováno v: iScience, Vol 25, Iss 11, Pp 104993- (2022)

Summary: The MetaSUB Consortium, founded in 2015, is a global consortium with an interdisciplinary team of clinicians, scientists, bioinformaticians, engineers, and designers, with members from more than 100 countries across the globe. This network h

Externí odkaz: https://doaj.org/article/f1cb844b21cb41f1b5a250cbfad15c5a

Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications

Autor: Keith J. M. Moore, Jeremy Cahill, Guy Aidelberg, Rachel Aronoff, Ali Bektaş, Daniela Bezdan, Daniel J. Butler, Sridar V. Chittur, Martin Codyre, Fernan Federici, Nathan A. Tanner, Scott W. Tighe, Randy True, Sarah B. Ware, Anne L. Wyllie, Evan E. Afshin, Andres Bendesky, Connie B. Chang, Richard Dela Rosa, Eran Elhaik, David Erickson, Andrew S. Goldsborough, George Grills, Kathrin Hadasch, Andrew Hayden, Seong-Young Her, Julie A. Karl, Chang Hee Kim, Alison J. Kriegel, Thomas Kunstman, Zeph Landau, Kevin Land, Bradley W. Langhorst, Ariel B. Lindner, Benjamin E. Mayer, Lee A. McLaughlin, Matthew T. McLaughlin, Jenny Molloy, Christopher Mozsary, Jerry L. Nadler, Melinee D'Silva, David Ng, David H. O'Connor, Jerry E. Ongerth, Olayinka Osuolale, Ana Pinharanda, Dennis Plenker, Ravi Ranjan, Michael Rosbash, Assaf Rotem, Jacob Segarra, Stephan Schürer, Scott Sherrill-Mix, Helena Solo-Gabriele, Shaina To, Merly C. Vogt, Albert D. Yu, Christopher E. Mason

Publikováno v: J Biomol Tech

As the second year of the COVID-19 pandemic begins, it remains clear that a massive increase in the ability to test for SARS-CoV-2 infections in a myriad of settings is critical to controlling the pandemic and to preparing for future outbreaks. The c

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dcc7049220c378abd20bf95f74cd84ab
https://pubmed.ncbi.nlm.nih.gov/35136384

Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study

Autor: Jenny Xiang, Phoebe K. Laaguiby, Xia Zhao, Fritz J. Sedlazeck, Medhat Mahmoud, George Grills, Shawn Levy, Zachary T. Herbert, Wenwei Zhang, Wayne E. Clarke, Marta Byrska-Bishop, Jonathan Foox, Christopher E. Mason, Michael M. Khayat, Justin M. Zook, Scott Tighe, Gary P. Schroth, Don A. Baldwin, William G. Farmerie, Yonggang Zhao, Haorong Lu, Giuseppe Narzisi, Alicia Alonso, Jin Jen, Charles M Nicolet, Fei Teng, Derek Warner

Publikováno v: Foox, J, Tighe, S W, Nicolet, C M, Zook, J M, Byrska-Bishop, M, Clarke, W E, Khayat, M M, Mahmoud, M, Laaguiby, P K, Herbert, Z T, Warner, D, Grills, G S, Jen, J, Levy, S, Xiang, J, Alonso, A, Zhao, X, Zhang, W, Teng, F, Zhao, Y, Lu, H, Schroth, G P, Narzisi, G, Farmerie, W, Sedlazeck, F J, Baldwin, D A & Mason, C E 2021, ' Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study ', Nature Biotechnology, vol. 39, no. 9, pp. 1129-1140 . https://doi.org/10.1038/s41587-021-01049-5
Nat Biotechnol

Assessing the reproducibility, accuracy and utility of massively parallel DNA sequencing platforms remains an ongoing challenge. Here the Association of Biomolecular Resource Facilities (ABRF) Next-Generation Sequencing Study benchmarks the performan

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a8f8b114451f85603922ae5ecc615226
https://orbit.dtu.dk/en/publications/18933943-45b3-4238-b4c2-4c29a08126a1

Lessons learned from SARS-CoV-2 measurements in wastewater

Autor: Brian D. Reding, Yoslayma Cardentey, Christopher C. Mader, Sion L. Williams, Matthew A. Roca, Jenny M. Kemper, Erin Kobetz, Kristina M. Babler, Mark Sharkey, Alejandro Mantero, Bhavarth Shukla, Naresh Kumar, Thomas Stone, Richard Kenney, Benjamin Young, Walter Lamar, Krista Ryon, Anda Z. Quintero, Christopher E. Mason, Melinda Minucci Boone, Elena M. Cortizas, Mario Stevenson, Dusica Vidovic, Helena M. Solo-Gabriele, John J. Tallon, James Herrin, Stephan C. Schürer, Natasha Schaefer Solle, Sreeharsha S. Venkatapuram, George Grills, Jennifer Laine

Publikováno v: The Science of the Total Environment

Standardized protocols for wastewater-based surveillance (WBS) for the RNA of SARS-CoV-2, the virus responsible for the current COVID-19 pandemic, are being developed and refined worldwide for early detection of disease outbreaks. We report here on l

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4034ce1fabd651838599f03eba60e23a
https://doi.org/10.1016/j.scitotenv.2021.149177

The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight

Autor: Sara Ahadi, Kumar Sharma, Stuart M. C. Lee, Alan R. Hargens, Kévin Contrepois, Francine E. Garrett-Bakelman, George Grills, Rakel Tryggvadottir, Martina Heer, Douglas J. Ebert, Andrew N. Hoofnagle, Maneesh Arya, Aditya Ambati, Martha Hotz Vitaterna, George E. Chlipala, Ali Keshavarzian, Kiichi Nakahira, Ari Melnick, Michael G. Ziegler, Kerry George, Lindsay F. Rizzardi, David F. Dinges, Colin M. Callahan, Scott M. Smith, Maryam Afkarian, Fred W. Turek, Caroline Sheridan, John Goutsias, Ryan P. Hillary, Sarah B. Lumpkins, Miles J. McKenna, Sara R. Zwart, Jamila H. Siamwala, Tyler M. Moore, Mark Maienschein-Cline, Immaculata De Vivo, Songjie Chen, Brittany Lee-McMullen, Ebrahim Afshinnekoo, Denis Salins, Dorothy D. Sears, Jason I. Feinberg, Tejaswini Mishra, Hemal H. Patel, Lynn Taylor, Michael Snyder, Benjamin Van Espen, Varsha Rao, Mathias Basner, Cem Meydan, Jorge Gandara, Brinda K. Rana, Stefan J. Green, Jad Nasrini, Tomas Vaisar, Brandon R. Macias, Susan M. Bailey, Jan M. Schilling, Michael B. Stenger, Jing Zhang, Matthew MacKay, Manjula Darshi, Vivian Hook, Marisa Covington, Ruben C. Gur, Rintaro Saito, Brian D. Piening, Brian Crucian, Steven S. Laurie, Emmanuel Mignot, Ling Lin, Robert Pietrzyk, Augustine M.K. Choi, Christopher E. Mason, Peng Jiang, Daniela Bezdan, John B. Charles, Graham B. I. Scott, Craig E. Kundrot, Andrew P. Feinberg, Garrett Jenkinson, Alexander E. Urban

Publikováno v: Science (New York, N.Y.), vol 364, iss 6436

INTRODUCTION To date, 559 humans have been flown into space, but long-duration (>300 days) missions are rare (n = 8 total). Long-duration missions that will take humans to Mars and beyond are planned by public and private entities for the 2020s and 2

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6e54a5ca46a4bb60cbe0f589fea9f752
https://pubmed.ncbi.nlm.nih.gov/31068707