Gene panel selection for targeted spatial transcriptomics

Autor: Yida Zhang, Viktor Petukhov, Evan Biederstedt, Richard Que, Kun Zhang, Peter V. Kharchenko

Publikováno v: Genome Biology, Vol 25, Iss 1, Pp 1-25 (2024)

Abstract Targeted spatial transcriptomics hold particular promise in analyzing complex tissues. Most such methods, however, measure only a limited panel of transcripts, which need to be selected in advance to inform on the cell types or processes bei

Externí odkaz: https://doaj.org/article/5400b0ad82bd43918520150a06bfd4c4

Gene panel selection for targeted spatial transcriptomics.

Autor: Zhang Y; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; Department of Neurobiology, Duke University, Durham, NC, USA., Petukhov V; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Biederstedt E; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Que R; Department of Bioengineering, University of California San Diego, La Jolla, CA, USA., Zhang K; Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.; San Diego Institute of Science, Altos Labs, San Diego, CA, USA., Kharchenko PV; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; San Diego Institute of Science, Altos Labs, San Diego, CA, USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2023 Mar 24. Date of Electronic Publication: 2023 Mar 24.