Zobrazeno 1 - 10
of 109
pro vyhledávání: '"Gene duplication and loss"'
Publikováno v:
Horticulturae, Vol 9, Iss 11, p 1174 (2023)
The Knotted1-like homeobox (KNOX) gene family plays a pivotal role in regulating meristem activity, organ differentiation, and cell meristematic identity. However, there has been a lack of large-scale, systematic, and comprehensive comparative analys
Externí odkaz:
https://doaj.org/article/0c36d5fa76284de8b9e837e8a624f164
Autor:
Qiaoying Pei, Tong Yu, Tong Wu, Qihang Yang, Ke Gong, Rong Zhou, Chunlin Cui, Ying Yu, Wei Zhao, Xi Kang, Rui Cao, Xiaoming Song
Publikováno v:
Horticultural Plant Journal, Vol 7, Iss 5, Pp 457-468 (2021)
Apiaceae is a major family from Apiales and includes many important vegetable and medicinal crops. Heat shock transcription factors (Hsf) play important roles in heat tolerance during plant development. Here, we conducted systematic analyses of the H
Externí odkaz:
https://doaj.org/article/2d9c8cbab1974359bda77f5d8c9e0d78
Autor:
Dick Roelofs, Arthur Zwaenepoel, Tom Sistermans, Joey Nap, Andries A. Kampfraath, Yves Van de Peer, Jacintha Ellers, Ken Kraaijeveld
Publikováno v:
BMC Biology, Vol 18, Iss 1, Pp 1-13 (2020)
Abstract Background Gene duplication events play an important role in the evolution and adaptation of organisms. Duplicated genes can arise through different mechanisms, including whole-genome duplications (WGDs). Recently, WGD was suggested to be an
Externí odkaz:
https://doaj.org/article/283edb5182374ce9b5bb3ffa64a7f436
Autor:
Tong Wang, Jingjing Hu, Xiao Ma, Chunjin Li, Qihang Yang, Shuyan Feng, Miaomiao Li, Nan Li, Xiaoming Song
Publikováno v:
BMC Genomics, Vol 21, Iss 1, Pp 1-14 (2020)
Abstract Background Brassica is a very important genus of Brassicaceae, including many important oils, vegetables, forage crops, and ornamental horticultural plants. TLP family genes play important regulatory roles in the growth and development of pl
Externí odkaz:
https://doaj.org/article/16c23526b8b54673ab71b7b847f94f50
Publikováno v:
Journal of Fungi, Vol 8, Iss 11, p 1159 (2022)
In recent years, many publications have established histone lysine methylation as a central epigenetic modification in the regulation of chromatin and transcription. The histone lysine methyltransferases contain a conserved SET domain and are widely
Externí odkaz:
https://doaj.org/article/242b6089dd4d425b9642885fdf7ecfee
Publikováno v:
BMC Bioinformatics, Vol 20, Iss S20, Pp 1-13 (2019)
Abstract Background Reconciliation methods are widely used to explain incongruence between a gene tree and species tree. However, the common approach of inferring maximum parsimony reconciliations (MPRs) relies on user-defined costs for each type of
Externí odkaz:
https://doaj.org/article/6b7ef9cdaacb487eaa1a56b9ad1927fb
Autor:
Qiaoying Pei, Nan Li, Qihang Yang, Tong Wu, Shuyan Feng, Xuehuan Feng, Zange Jing, Rong Zhou, Ke Gong, Tong Yu, Zhen Wang, Xiaoming Song
Publikováno v:
Frontiers in Genetics, Vol 11 (2021)
The family Apiaceae includes many important vegetables and medicinal plants. Auxin response factors (ARFs) play critical roles in regulating plant growth and development. Here, we performed a comprehensive analysis of the ARF gene family in three Api
Externí odkaz:
https://doaj.org/article/dbf6577b33304d05830d9b095de1ff1f
Autor:
John V. Nahas, Christine L. Iosue, Noor F. Shaik, Kathleen Selhorst, Bin Z. He, Dennis D. Wykoff
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 8, Iss 7, Pp 2333-2343 (2018)
Convergent evolution is often due to selective pressures generating a similar phenotype. We observe relatively recent duplications in a spectrum of Saccharomycetaceae yeast species resulting in multiple phosphatases that are regulated by different nu
Externí odkaz:
https://doaj.org/article/2a74d06cfa72460781e77455c9a2dee4
Autor:
Md Shamsuzzoha Bayzid, Tandy Warnow
Publikováno v:
Algorithms for Molecular Biology, Vol 13, Iss 1, Pp 1-12 (2018)
Abstract Motivation Species tree estimation from gene trees can be complicated by gene duplication and loss, and “gene tree parsimony” (GTP) is one approach for estimating species trees from multiple gene trees. In its standard formulation, the o
Externí odkaz:
https://doaj.org/article/524edca487054b8981b57e4089eba959
Publikováno v:
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)
Abstract Background In phylogenetics, we often seek to reconcile gene trees with species trees within the framework of an evolutionary model. While the most popular models for eukaryotic species allow for only gene duplication and gene loss or only m
Externí odkaz:
https://doaj.org/article/a6f7be9e898b401ba15a5c4093d518db