Whole Genomes Reveal Evolutionary Relationships and Mechanisms Underlying Gene-Tree Discordance in Neodiprion Sawflies.

Autor: Herrig DK; Department of Biology, University of Kentucky, 195 Huguelet Dr., Lexington, KY 40508, USA., Ridenbaugh RD; Department of Biology, University of Kentucky, 195 Huguelet Dr., Lexington, KY 40508, USA., Vertacnik KL; Department of Biology, University of Kentucky, 195 Huguelet Dr., Lexington, KY 40508, USA., Everson KM; Department of Natural Resources and Environmental Science, University of Nevada, 1664 N. Virginia St., Reno, NV 89557, USA.; Department of Integrative Biology, Oregon State University, 4575 SW Research Way, Corvallis, OR 97333, USA., Sim SB; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, 64 Nowelo St., Hilo, HI 96720, USA., Geib SM; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, 64 Nowelo St., Hilo, HI 96720, USA., Weisrock DW; Department of Biology, University of Kentucky, 195 Huguelet Dr., Lexington, KY 40508, USA., Linnen CR; Department of Biology, University of Kentucky, 195 Huguelet Dr., Lexington, KY 40508, USA.

Publikováno v: Systematic biology [Syst Biol] 2024 Oct 30; Vol. 73 (5), pp. 839-860.

Chromosome-scale genome of the polyphagous pest Anastrepha ludens (Diptera: Tephritidae) provides insights on sex chromosome evolution in Anastrepha.

Autor: Congrains C; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA.; Department of Plant and Environmental Protection Services, University of Hawaii at Manoa, Honolulu, HI 96822, USA., Sim SB; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Paulo DF; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA.; Department of Plant and Environmental Protection Services, University of Hawaii at Manoa, Honolulu, HI 96822, USA., Corpuz RL; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Kauwe AN; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Simmonds TJ; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Simpson SA; U.S. Department of Agriculture-Agricultural Research Service, Genomics and Bioinformatics Research Unit, Stoneville, MS 38776, USA., Scheffler BE; U.S. Department of Agriculture-Agricultural Research Service, Genomics and Bioinformatics Research Unit, Stoneville, MS 38776, USA., Geib SM; U.S. Department of Agriculture-Agricultural Research Service, Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA.

Publikováno v: G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Oct 04. Date of Electronic Publication: 2024 Oct 04.

Recurrent selection shapes the genomic landscape of differentiation between a pair of host-specialized haplodiploids that diverged with gene flow.

Autor: Glover AN; Department of Biology, University of Kentucky, Lexington, Kentucky, USA., Sousa VC; Department of Animal Biology, CE3C - Center for Ecology, Evolution and Environmental Changes, Faculdade de Ciências da Universidade de Lisboa, University of Lisbon, Lisbon, Lisboa, Portugal., Ridenbaugh RD; Department of Biology, University of Kentucky, Lexington, Kentucky, USA., Sim SB; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, Hawaii, USA., Geib SM; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, Hawaii, USA., Linnen CR; Department of Biology, University of Kentucky, Lexington, Kentucky, USA.

Publikováno v: Molecular ecology [Mol Ecol] 2024 Sep; Vol. 33 (18), pp. e17509. Date of Electronic Publication: 2024 Aug 20.

Towards a better future for DNA barcoding: Evaluating monophyly- and distance-based species identification using COI gene fragments of Dacini fruit flies.

Autor: Doorenweerd C; Entomology Section, Department of Plant and Environmental Protection Sciences, College of Tropical Agriculture and Human Resources, University of Hawai'i at Mānoa, Honolulu, Hawaii, USA., San Jose M; Entomology Section, Department of Plant and Environmental Protection Sciences, College of Tropical Agriculture and Human Resources, University of Hawai'i at Mānoa, Honolulu, Hawaii, USA., Leblanc L; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, Idaho, USA., Barr N; United States Department of Agriculture, Animal and Plant Health Inspection Service, Plant Protection and Quarantine, Science & Technology, Insect Management and Molecular Diagnostics Laboratory, Edinburg, Texas, USA., Geib SM; Tropical Pest Genetics and Molecular Biology Research Unit, Daniel K. Inouye U.S. Pacific Basin Agricultural Center, USDA Agricultural Research Services, Hilo, Hawaii, USA., Chung AYC; Forest Research Centre, Sabah Forestry Department, Sandakan, Sabah, Malaysia., Dupuis JR; Department of Entomology, University of Kentucky, Lexington, Kentucky, USA., Ekayanti A; Niogret Ecology Consulting LLC, Wotu, Luwu Timor, Sulawesi Seleaton, Indonesia., Fiegalan E; Department of Crop Protection, College of Agriculture, Central Luzon State University, Science City of Muñoz, Nueva Ecija, Philippines., Hemachandra KS; Faculty of Agriculture, University of Peradeniya, Peradeniya, Sri Lanka., Aftab Hossain M; Insect Biotechnology Division, Institute of Food and Radiation Biology, Bangladesh Atomic Energy Commission, Dhaka, Bangladesh., Huang CL; Institute of Oceanography, Minjiang University, Fuzhou, Fujian, China., Hsu YF; Department of Life Science, National Taiwan Normal University, Taipei, Taiwan, ROC., Morris KY; Tropical Pest Genetics and Molecular Biology Research Unit, Daniel K. Inouye U.S. Pacific Basin Agricultural Center, USDA Agricultural Research Services, Hilo, Hawaii, USA., Maryani A Mustapeng A; Forest Research Centre, Sabah Forestry Department, Sandakan, Sabah, Malaysia., Niogret J; Centre for Tropical Environmental & Sustainability Science, Nguma-Bada Campus, James Cook University, Smithfield, Queensland, Australia., Pham TH; Mientrung Institute for Scientific Research, Vietnam Academy of Science and Technology (VAST), Hue, Vietnam.; Vietnam National Museum of Nature & Graduate School of Science and Technology, VAST, Hanoi, Vietnam., Thi Nguyen N; Faculty of Biotechnology, Vietnam National University of Agriculture, Hanoi, Vietnam., Sirisena UGAI; Department of Plant Sciences, Faculty of Agriculture, Rajarata University of Sri Lanka, Mihintale, Sri Lanka., Todd T; United States Department of Agriculture, Animal and Plant Health Inspection Service, Plant Protection and Quarantine, Science & Technology, Insect Management and Molecular Diagnostics Laboratory, Edinburg, Texas, USA., Rubinoff D; Entomology Section, Department of Plant and Environmental Protection Sciences, College of Tropical Agriculture and Human Resources, University of Hawai'i at Mānoa, Honolulu, Hawaii, USA.

Publikováno v: Molecular ecology resources [Mol Ecol Resour] 2024 Aug; Vol. 24 (6), pp. e13987. Date of Electronic Publication: 2024 Jul 02.

Genome report: chromosome-scale genome assembly of the West Indian fruit fly Anastrepha obliqua (Diptera: Tephritidae).

Autor: Sim SB; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Congrains C; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA.; Entomology Section, Department of Plant and Environmental Protection Sciences, University of Hawai'i at Mānoa Plant and Environmental Protection Sciences, Honolulu, HI 96822, USA., Velasco-Cuervo SM; Department of Agricultural, Food, and Nutritional Sciences, University of Alberta, Edmonton, Alberta T6G 2P5, Canada., Corpuz RL; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Kauwe AN; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA., Scheffler B; USDA-ARS Jamie Whitten Delta States Research Center, Genetics and Bioinformatics Research Unit, Stoneville, MS 38776, USA., Geib SM; USDA-ARS Daniel K. Inouye US Pacific Basin Agricultural Research Center, Tropical Pest Genetics and Molecular Biology Research Unit, Hilo, HI 96720, USA.

Publikováno v: G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Apr 03; Vol. 14 (4).