Recurrent evolution and selection shape structural diversity at the amylase locus.

Autor: Bolognini D; Human Technopole, Milan, Italy., Halgren A; Department of Integrative Biology, University of California Berkeley, Berkeley, CA, USA., Lou RN; Department of Integrative Biology, University of California Berkeley, Berkeley, CA, USA., Raveane A; Human Technopole, Milan, Italy., Rocha JL; Department of Integrative Biology, University of California Berkeley, Berkeley, CA, USA., Guarracino A; Department of Genetics, Genomics, and Informatics, University of Tennessee Health Science Center, Memphis, TN, USA., Soranzo N; Human Technopole, Milan, Italy.; Wellcome Sanger Institute, Hinxton, UK.; National Institute for Health Research Blood and Transplant Research Unit in Donor Health and Genomics, University of Cambridge, Cambridge, UK.; Department of Haematology, Cambridge Biomedical Campus, Cambridge, UK.; British Heart Foundation Centre of Research Excellence, University of Cambridge, Cambridge, UK., Chin CS; Foundation for Biological Data Science, Belmont, CA, USA., Garrison E; Department of Genetics, Genomics, and Informatics, University of Tennessee Health Science Center, Memphis, TN, USA. egarris5@uthsc.edu., Sudmant PH; Department of Integrative Biology, University of California Berkeley, Berkeley, CA, USA. psudmant@berkeley.edu.; Center for Computational Biology, University of California Berkeley, Berkeley, CA, USA. psudmant@berkeley.edu.

Publikováno v: Nature [Nature] 2024 Oct; Vol. 634 (8034), pp. 617-625. Date of Electronic Publication: 2024 Sep 04.

Panacus: fast and exact pangenome growth and core size estimation.

Autor: Parmigiani L; Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33615, Germany., Garrison E; Department of Genetics, Genomics and Informatics, University of Tennessee Health Science Center, Memphis, TN 38163, United States., Stoye J; Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, 33615, Germany., Marschall T; Institute for Medical Biometry and Bioinformatics, Medical Faculty and University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, 40225, Germany.; Center for Digital Medicine, Heinrich Heine University Düsseldorf, Düsseldorf, 40225, Germany., Doerr D; Department for Endocrinology and Diabetology, Medical Faculty and University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, 40225, Germany.; German Diabetes Center (DDZ), Leibniz Institute for Diabetes Research, Düsseldorf, 40225, Germany.; Center for Digital Medicine, Heinrich Heine University Düsseldorf, Düsseldorf, 40225, Germany.

Publikováno v: Bioinformatics (Oxford, England) [Bioinformatics] 2024 Nov 29. Date of Electronic Publication: 2024 Nov 29.

High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation.

Autor: Gustafson JA; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA.; Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195, USA., Gibson SB; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA.; Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA., Damaraju N; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA.; Institute for Public Health Genetics, University of Washington, Seattle, Washington 98195, USA., Zalusky MPG; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Hoekzema K; Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA., Twesigomwe D; Sydney Brenner Institute for Molecular Bioscience, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg 2193, South Africa., Yang L; Pacific Northwest Research Institute, Seattle, Washington 98122, USA., Snead AA; Department of Biology, New York University, New York, New York 10003, USA., Richmond PA; Alamya Health, Baton Rouge, Louisiana 70806, USA., De Coster W; Applied and Translational Neurogenomics Group, VIB Center for Molecular Neurology, VIB, Antwerp 2650, Belgium.; Department of Biomedical Sciences, University of Antwerp, Antwerp 2000, Belgium., Olson ND; Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA., Guarracino A; Department of Genetics, Genomics and Informatics, University of Tennessee Health Science Center, Memphis, Tennessee 38163, USA.; Human Technopole, Milan 20157, Italy., Li Q; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland 21218, USA., Miller AL; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Goffena J; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Anderson ZB; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Storz SHR; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Ward SA; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Sinha M; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA., Gonzaga-Jauregui C; International Laboratory for Human Genome Research, Laboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma de México, Mexico City 76230, Mexico., Clarke WE; New York Genome Center, New York, New York 10013, USA.; Outlier Informatics Inc., Saskatoon, Saskatchewan S7H 1L4, Canada., Basile AO; New York Genome Center, New York, New York 10013, USA., Corvelo A; New York Genome Center, New York, New York 10013, USA., Reeves C; New York Genome Center, New York, New York 10013, USA., Helland A; New York Genome Center, New York, New York 10013, USA., Musunuri RL; New York Genome Center, New York, New York 10013, USA., Revsine M; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland 21218, USA., Patterson KE; Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA., Paschal CR; Department of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington 98195, USA.; Department of Laboratories, Seattle Children's Hospital, Seattle, Washington 98195, USA., Zakarian C; Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA., Goodwin S; Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA., Jensen TD; Department of Genetics, Stanford University, Stanford, California 94305, USA., Robb E; Department of Computer Science, Stanford University, Stanford, California 94305, USA., McCombie WR; Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA., Sedlazeck FJ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 77030, USA.; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.; Department of Computer Science, Rice University, Houston, Texas 77251, USA., Zook JM; Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA., Montgomery SB; Department of Genetics, Stanford University, Stanford, California 94305, USA., Garrison E; Department of Genetics, Genomics and Informatics, University of Tennessee Health Science Center, Memphis, Tennessee 38163, USA., Kolmogorov M; Cancer Data Science Laboratory, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA., Schatz MC; Human Technopole, Milan 20157, Italy., McLaughlin RN Jr; Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195, USA.; Pacific Northwest Research Institute, Seattle, Washington 98122, USA., Dashnow H; Department of Human Genetics, University of Utah, Salt Lake City, Utah 84112, USA.; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, Colorado 80045, USA., Zody MC; International Laboratory for Human Genome Research, Laboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma de México, Mexico City 76230, Mexico., Loose M; Deep Seq, School of Life Sciences, University of Nottingham, Nottingham NG7 2TQ, UK., Jain M; Department of Bioengineering, Northeastern University, Boston, Massachusetts 02115, USA.; Department of Physics, Northeastern University, Boston, Massachusetts 02115, USA.; Khoury College of Computer Sciences, Northeastern University, Boston, Massachusetts 02115, USA., Eichler EE; Department of Genome Sciences, University of Washington, Seattle, Washington 98195, USA.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, Washington 98195, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, Washington 98195, USA., Miller DE; Division of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA; dm1@uw.edu.; Department of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington 98195, USA.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, Washington 98195, USA.

Publikováno v: Genome research [Genome Res] 2024 Nov 20; Vol. 34 (11), pp. 2061-2073. Date of Electronic Publication: 2024 Nov 20.

Creating a biomedical knowledge base by addressing GPT inaccurate responses and benchmarking context.

Autor: Darnell SS; University of Tennessee Health Science Center, Memphis, TN, USA., Overall RW; University of Tennessee Health Science Center, Memphis, TN, USA.; Humboldt University, Institute of Biology, Berlin, Germany., Guarracino A; University of Tennessee Health Science Center, Memphis, TN, USA., Colonna V; University of Tennessee Health Science Center, Memphis, TN, USA., Villani F; University of Tennessee Health Science Center, Memphis, TN, USA., Garrison E; University of Tennessee Health Science Center, Memphis, TN, USA., Isaac A; University College London, London, UK., Muli P; GeneNetwork Systems Genetics Software Development Team, Nairobi, Kenya., Muriithi FM; University of Tennessee Health Science Center, Memphis, TN, USA.; GeneNetwork Systems Genetics Software Development Team, Nairobi, Kenya., Kabui A; GeneNetwork Systems Genetics Software Development Team, Nairobi, Kenya., Kilyungi M; GeneNetwork Systems Genetics Software Development Team, Nairobi, Kenya., Lisso F; GeneNetwork Systems Genetics Software Development Team, Nairobi, Kenya.; Pwani University, Kilifi, Kenya., Kibet A; FahamuAI, Nairobi, Kenya., Muhia B; FahamuAI, Nairobi, Kenya., Nijveen H; Wageningen University, Bioinformatics, Wageningen, The Netherlands., Yousefi S; University of Tennessee Health Science Center, Memphis, TN, USA., Ashbrook D; University of Tennessee Health Science Center, Memphis, TN, USA., Huang P; Cornell University, School of Electrical and Computer Engineering, Ithaca, USA., Suh GE; Cornell University, School of Electrical and Computer Engineering, Ithaca, USA.; NVIDIA Research, USA., Umar M; Cornell University, School of Electrical and Computer Engineering, Ithaca, USA., Batten C; Cornell University, School of Electrical and Computer Engineering, Ithaca, USA., Chen H; University of Tennessee Health Science Center, Memphis, TN, USA., Sen Ś; University of Tennessee Health Science Center, Memphis, TN, USA., Williams RW; University of Tennessee Health Science Center, Memphis, TN, USA., Prins P; University of Tennessee Health Science Center, Memphis, TN, USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 Oct 21. Date of Electronic Publication: 2024 Oct 21.

Complete sequencing of ape genomes.

Autor: Yoo D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Rhie A; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Hebbar P; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Antonacci F; Department of Biosciences, Biotechnology and Environment, University of Bari, Bari, 70124, Italy., Logsdon GA; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Department of Genetics, Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19103, USA., Solar SJ; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Antipov D; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Pickett BD; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Safonova Y; Computer Science and Engineering Department, Huck Institutes of Life Sciences, Pennsylvania State University, State College, PA 16801, USA., Montinaro F; Department of Biosciences, Biotechnology and Environment, University of Bari, Bari, 70124, Italy.; Institute of Genomics, University of Tartu, Tartu, Estonia., Luo Y; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, USA., Malukiewicz J; Research Unit for Evolutionary Immunogenomics, Department of Biology, University of Hamburg, 20146 Hamburg, Germany., Storer JM; Institute for Systems Genomics, University of Connecticut, Storrs, CT 06269, USA., Lin J; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Sequeira AN; Department of Biology, Penn State University, University Park, PA 16802, USA., Mangan RJ; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; Genetics Training Program, Harvard Medical School, Boston, MA 02115, USA., Hickey G; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Anez GM; Stowers Institute for Medical Research, Kansas City, MO 64110, USA., Balachandran P; The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA., Bankevich A; Computer Science and Engineering Department, Huck Institutes of Life Sciences, Pennsylvania State University, State College, PA 16801, USA., Beck CR; Institute for Systems Genomics, University of Connecticut, Storrs, CT 06269, USA.; The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.; Department of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, CT, USA., Biddanda A; Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA., Borchers M; Stowers Institute for Medical Research, Kansas City, MO 64110, USA., Bouffard GG; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Brannan E; Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA., Brooks SY; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Carbone L; Department of Medicine, KCVI, Oregon Health Sciences University, Portland, OR, USA.; Division of Genetics, Oregon National Primate Research Center, Beaverton, OR, USA., Carrel L; PSU Medical School, Penn State University School of Medicine, Hershey, PA, USA., Chan AP; The Translational Genomics Research Institute, a part of the City of Hope National Medical Center, Phoenix, AZ, USA., Crawford J; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Diekhans M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Engelbrecht E; Department of Biochemistry and Molecular Genetics, School of Medicine, University of Louisville, Louisville, KY, USA., Feschotte C; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA., Formenti G; Vertebrate Genome Laboratory, The Rockefeller University, New York, NY 10021, USA., Garcia GH; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., de Gennaro L; Department of Biosciences, Biotechnology and Environment, University of Bari, Bari, 70124, Italy., Gilbert D; San Diego Biomedical Research Institute, San Diego, CA, USA., Green RE; University of California Santa Cruz, Santa Cruz, CA, USA., Guarracino A; Department of Genetics, Genomics and Informatics, University of Tennessee Health Science Center, Memphis, TN 38163, USA., Gupta I; Department of Computer Science and Engineering, University of California San Diego, CA, USA., Haddad D; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Han J; Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, China., Harris RS; Department of Biology, Penn State University, University Park, PA 16802, USA., Hartley GA; Institute for Systems Genomics, University of Connecticut, Storrs, CT 06269, USA., Harvey WT; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Hiller M; LOEWE Centre for Translational Biodiversity Genomics, Senckenberg Research Institute, Goethe University, Frankfurt, Germany., Hoekzema K; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Houck ML; San Diego Zoo Wildlife Alliance, Escondido, CA, 92027-7000, USA., Jeong H; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA., Kamali K; Department of Biology, Penn State University, University Park, PA 16802, USA., Kellis M; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Kille B; Department of Computer Science, Rice University, Houston, TX 77005, USA., Lee C; Laboratory of Neurogenetics of Language, The Rockefeller University, New York, NY, USA., Lee Y; Laboratory of bioinformatics and population genetics, Interdisciplinary program in bioinformatics, Seoul National University, Republic of Korea., Lees W; Department of Biochemistry and Molecular Genetics, School of Medicine, University of Louisville, Louisville, KY, USA.; Bioengineering Program, Faculty of Engineering, Bar-Ilan University, Ramat Gan, Israel., Lewis AP; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Li Q; Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA., Loftus M; Department of Genetics & Biochemistry, Clemson University, Clemson, SC, USA.; Center for Human Genetics, Clemson University, Greenwood, SC, USA., Loh YHE; Neuroscience Research Institute, University of California, Santa Barbara, CA, USA., Loucks H; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Ma J; Ray and Stephanie Lane Computational Biology Department, School of Computer Science, Carnegie Mellon University, PA, USA., Mao Y; Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, China.; Center for Genomic Research, International Institutes of Medicine, Fourth Affiliated Hospital, Zhejiang University, Yiwu, Zhejiang, China.; Shanghai Jiao Tong University Chongqing Research Institute, Chongqing, China., Martinez JFI; Computer Science and Engineering Department, Huck Institutes of Life Sciences, Pennsylvania State University, State College, PA 16801, USA., Masterson P; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., McCoy RC; Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA., McGrath B; Department of Biology, Penn State University, University Park, PA 16802, USA., McKinney S; Stowers Institute for Medical Research, Kansas City, MO 64110, USA., Meyer BS; Research Unit for Evolutionary Immunogenomics, Department of Biology, University of Hamburg, 20146 Hamburg, Germany., Miga KH; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Mohanty SK; Department of Biology, Penn State University, University Park, PA 16802, USA., Munson KM; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Pal K; Department of Biology, Penn State University, University Park, PA 16802, USA., Pennell M; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA., Pevzner PA; Department of Computer Science and Engineering, University of California San Diego, CA, USA., Porubsky D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Potapova T; Stowers Institute for Medical Research, Kansas City, MO 64110, USA., Ringeling FR; Faculty of Informatics and Data Science, University of Regensburg, 93053 Regensburg, Germany., Roha JL; Department of Integrative Biology, University of California, Berkeley, Berkeley, USA., Ryder OA; San Diego Zoo Wildlife Alliance, Escondido, CA, 92027-7000, USA., Sacco S; University of California Santa Cruz, Santa Cruz, CA, USA., Saha S; Department of Biochemistry and Molecular Genetics, School of Medicine, University of Louisville, Louisville, KY, USA., Sasaki T; San Diego Biomedical Research Institute, San Diego, CA, USA., Schatz MC; Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA., Schork NJ; The Translational Genomics Research Institute, a part of the City of Hope National Medical Center, Phoenix, AZ, USA., Shanks C; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Smeds L; Department of Biology, Penn State University, University Park, PA 16802, USA., Son DR; Department of Ecology, Evolution and Marine Biology, Neuroscience Research Institute, University of California, Santa Barbara, CA, USA., Steiner C; San Diego Zoo Wildlife Alliance, Escondido, CA, 92027-7000, USA., Sweeten AP; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Tassia MG; Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA., Thibaud-Nissen F; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Torres-González E; Department of Biology, Penn State University, University Park, PA 16802, USA., Trivedi M; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA., Wei W; School of Life Sciences, Westlake University, Hangzhou 310024, China.; National Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, 430070, Wuhan, China., Wertz J; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA., Yang M; Ray and Stephanie Lane Computational Biology Department, School of Computer Science, Carnegie Mellon University, PA, USA., Zhang P; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA., Zhang S; Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, China., Zhang Y; Ray and Stephanie Lane Computational Biology Department, School of Computer Science, Carnegie Mellon University, PA, USA., Zhang Z; Department of Computer Science and Engineering, University of California San Diego, CA, USA., Zhao SA; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Zhu Y; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA., Jarvis ED; Laboratory of Neurogenetics of Language, The Rockefeller University, New York, NY, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA., Gerton JL; Stowers Institute for Medical Research, Kansas City, MO 64110, USA., Rivas-González I; Department of Primate Behavior and Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Paten B; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA., Szpiech ZA; Department of Biology, Penn State University, University Park, PA 16802, USA., Huber CD; Department of Biology, Penn State University, University Park, PA 16802, USA., Lenz TL; Research Unit for Evolutionary Immunogenomics, Department of Biology, University of Hamburg, 20146 Hamburg, Germany., Konkel MK; Department of Genetics & Biochemistry, Clemson University, Clemson, SC, USA.; Center for Human Genetics, Clemson University, Greenwood, SC, USA., Yi SV; Department of Ecology, Evolution and Marine Biology, Department of Molecular, Cellular and Developmental Biology, Neuroscience Research Institute, University of California, Santa Barbara, CA, USA., Canzar S; Faculty of Informatics and Data Science, University of Regensburg, 93053 Regensburg, Germany., Watson CT; Department of Biochemistry and Molecular Genetics, School of Medicine, University of Louisville, Louisville, KY, USA., Sudmant PH; Department of Integrative Biology, University of California, Berkeley, Berkeley, USA.; Center for Computational Biology, University of California, Berkeley, Berkeley, USA., Molloy E; Department of Computer Science, University of Maryland, College Park, MD 20742, USA., Garrison E; Department of Genetics, Genomics and Informatics, University of Tennessee Health Science Center, Memphis, TN 38163, USA., Lowe CB; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, USA., Ventura M; Department of Biosciences, Biotechnology and Environment, University of Bari, Bari, 70124, Italy., O'Neill RJ; Institute for Systems Genomics, University of Connecticut, Storrs, CT 06269, USA.; Department of Genetics and Genome Sciences, University of Connecticut Health Center, Farmington, CT, USA.; Departments of Molecular and Cell Biology, UConn Storrs, CT, USA., Koren S; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Makova KD; Department of Biology, Penn State University, University Park, PA 16802, USA., Phillippy AM; Genome Informatics Section, Center for Genomics and Data Science Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA., Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2024 Oct 05. Date of Electronic Publication: 2024 Oct 05.