Zobrazeno 1 - 10
of 79
pro vyhledávání: '"Gabriel Krouk"'
Autor:
Clément Carré, Jean Baptiste Carluer, Christian Chaux, Chad Estoup-Streiff, Nicolas Roche, Eric Hosy, André Mas, Gabriel Krouk
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-19 (2024)
Abstract The problem of missing heritability requires the consideration of genetic interactions among different loci, called epistasis. Current GWAS statistical models require years to assess the entire combinatorial epistatic space for a single phen
Externí odkaz:
https://doaj.org/article/d29a761466e34d31b01162a072cafa48
Autor:
José M. Alvarez, Anna-Lena Schinke, Matthew D. Brooks, Angelo Pasquino, Lauriebeth Leonelli, Kranthi Varala, Alaeddine Safi, Gabriel Krouk, Anne Krapp, Gloria M. Coruzzi
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)
Conventional methods cannot reveal transient transcription factors (TFs) and targets interactions. Here, Alvarez et al. capture both stable and transient TF-target interactions by time-series ChIP-seq and/or DamID-seq in a cell-based TF perturbation
Externí odkaz:
https://doaj.org/article/3e7c1767b2d34c089055f0b932128ac5
Autor:
Matthew D. Brooks, Jacopo Cirrone, Angelo V. Pasquino, Jose M. Alvarez, Joseph Swift, Shipra Mittal, Che-Lun Juang, Kranthi Varala, Rodrigo A. Gutiérrez, Gabriel Krouk, Dennis Shasha, Gloria M. Coruzzi
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
Temporal control of transcriptional networks enables organisms to adapt to changing environment. Here, the authors use a scaled-up cell-based assay to identify direct targets of nitrogen-early responsive transcription factors and validate a network p
Externí odkaz:
https://doaj.org/article/8373c4440151476f9e29c51167aed1f3
Autor:
Nathalie Berger, Vincent Demolombe, Sonia Hem, Valérie Rofidal, Laura Steinmann, Gabriel Krouk, Amandine Crabos, Philippe Nacry, Lionel Verdoucq, Véronique Santoni
Publikováno v:
International Journal of Molecular Sciences, Vol 23, Iss 4, p 1956 (2022)
Osmotic stress can be detrimental to plants, whose survival relies heavily on proteomic plasticity. Protein ubiquitination is a central post-translational modification in osmotic-mediated stress. In this study, we used the K-Ɛ-GG antibody enrichment
Externí odkaz:
https://doaj.org/article/e92f4fd44e9042368aa327af987a5bed
Publikováno v:
npj Systems Biology and Applications, Vol 3, Iss 1, Pp 1-15 (2017)
Gene Regulatory Networks: design and learning principles This work by Carré et al addresses central questions in biology, which are: how very large gene regulatory networks (GRNs) are organized, generate stable gene expression, and can be learnt usi
Externí odkaz:
https://doaj.org/article/b2ff80f10af5488bad23cb20ccd83369
Autor:
Mushtak Kisko, Nadia Bouain, Alaeddine Safi, Anna Medici, Robert C Akkers, David Secco, Gilles Fouret, Gabriel Krouk, Mark GM Aarts, Wolfgang Busch, Hatem Rouached
Publikováno v:
eLife, Vol 7 (2018)
All living organisms require a variety of essential elements for their basic biological functions. While the homeostasis of nutrients is highly intertwined, the molecular and genetic mechanisms of these dependencies remain poorly understood. Here, we
Externí odkaz:
https://doaj.org/article/a83e90a5612e4a3eb11452e1f67d3f5c
Autor:
Bastiaan O R Bargmann, Steffen Vanneste, Gabriel Krouk, Tal Nawy, Idan Efroni, Eilon Shani, Goh Choe, Jiří Friml, Dominique C Bergmann, Mark Estelle, Kenneth D Birnbaum
Publikováno v:
Molecular Systems Biology, Vol 9, Iss 1, Pp 1-13 (2013)
Abstract In plants, changes in local auxin concentrations can trigger a range of developmental processes as distinct tissues respond differently to the same auxin stimulus. However, little is known about how auxin is interpreted by individual cell ty
Externí odkaz:
https://doaj.org/article/7199349a5d9b4841bcd77d6b80d2f533
Autor:
Gabriel Krouk, Daniel Tranchina, Laurence Lejay, Alexis A Cruikshank, Dennis Shasha, Gloria M Coruzzi, Rodrigo A Gutiérrez
Publikováno v:
PLoS Computational Biology, Vol 5, Iss 3, p e1000326 (2009)
As sessile organisms, plants must cope with multiple and combined variations of signals in their environment. However, very few reports have studied the genome-wide effects of systematic signal combinations on gene expression. Here, we evaluate a hig
Externí odkaz:
https://doaj.org/article/e55224101cdb4b8ea6465f235fb214db
Publikováno v:
Trends in Plant Science.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7341cad0c0ebfe8add4b7ca3634d2113
https://doi.org/10.1016/j.tplants.2023.03.025
https://doi.org/10.1016/j.tplants.2023.03.025
Autor:
Gabriel Krouk, Teresa Fitzpatrick, Nicolaus Von Wirén, Priscille Steensma, Ying Liu, Michael Melzer, Rodolfo Augusto Maniero, Ricardo Fabiano Hettwer Giehl
Publikováno v:
Molecular plant, 15(5):820-839
Despite serving as a major inorganic nitrogen source for plants, ammonium causes toxicity at elevated concentrations, inhibiting root elongation early on. While previous studies have shown that ammonium-inhibited root development relates to ammonium
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::54ec07a99a2779b5317ff6e13fae9131
https://doi.org/10.1016/j.molp.2022.01.012
https://doi.org/10.1016/j.molp.2022.01.012