Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Gabriel E. Sanderson"'
Autor:
Nathan Wan, David Weinberg, Tzu-Yu Liu, Katherine Niehaus, Eric A. Ariazi, Daniel Delubac, Ajay Kannan, Brandon White, Mitch Bailey, Marvin Bertin, Nathan Boley, Derek Bowen, James Cregg, Adam M. Drake, Riley Ennis, Signe Fransen, Erik Gafni, Loren Hansen, Yaping Liu, Gabriel L. Otte, Jennifer Pecson, Brandon Rice, Gabriel E. Sanderson, Aarushi Sharma, John St. John, Catherina Tang, Abraham Tzou, Leilani Young, Girish Putcha, Imran S. Haque
Publikováno v:
BMC Cancer, Vol 19, Iss 1, Pp 1-10 (2019)
Abstract Background Blood-based methods using cell-free DNA (cfDNA) are under development as an alternative to existing screening tests. However, early-stage detection of cancer using tumor-derived cfDNA has proven challenging because of the small pr
Externí odkaz:
https://doaj.org/article/fe732f6285b646618c64630c5a91ae05
Autor:
Malachi Griffith, Obi L Griffith, Scott M Smith, Avinash Ramu, Matthew B Callaway, Anthony M Brummett, Michael J Kiwala, Adam C Coffman, Allison A Regier, Ben J Oberkfell, Gabriel E Sanderson, Thomas P Mooney, Nathaniel G Nutter, Edward A Belter, Feiyu Du, Robert L Long, Travis E Abbott, Ian T Ferguson, David L Morton, Mark M Burnett, James V Weible, Joshua B Peck, Adam Dukes, Joshua F McMichael, Justin T Lolofie, Brian R Derickson, Jasreet Hundal, Zachary L Skidmore, Benjamin J Ainscough, Nathan D Dees, William S Schierding, Cyriac Kandoth, Kyung H Kim, Charles Lu, Christopher C Harris, Nicole Maher, Christopher A Maher, Vincent J Magrini, Benjamin S Abbott, Ken Chen, Eric Clark, Indraniel Das, Xian Fan, Amy E Hawkins, Todd G Hepler, Todd N Wylie, Shawn M Leonard, William E Schroeder, Xiaoqi Shi, Lynn K Carmichael, Matthew R Weil, Richard W Wohlstadter, Gary Stiehr, Michael D McLellan, Craig S Pohl, Christopher A Miller, Daniel C Koboldt, Jason R Walker, James M Eldred, David E Larson, David J Dooling, Li Ding, Elaine R Mardis, Richard K Wilson
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 7, p e1004274 (2015)
In this work, we present the Genome Modeling System (GMS), an analysis information management system capable of executing automated genome analysis pipelines at a massive scale. The GMS framework provides detailed tracking of samples and data coupled
Externí odkaz:
https://doaj.org/article/8bd43ecac4d44f7cbb8d1a284c28cdab
Autor:
Abraham Tzou, Jennifer Pecson, Tzu-Yu Liu, Signe Fransen, John St. John, David E. Weinberg, Riley Ennis, Yaping Liu, Brandon J. Rice, Daniel Delubac, Nathan Boley, Marvin Bertin, Katherine E. Niehaus, Leilani Young, Aarushi Sharma, Girish Putcha, Adam Drake, James Cregg, Erik Gafni, Nathan Wan, Catherina Tang, Derek Bowen, Brandon White, Imran S. Haque, Ajay Kannan, Mitch Bailey, Gabriel E. Sanderson, Eric A. Ariazi, Gabriel Otte, Loren Hansen
Publikováno v:
BMC Cancer
BMC Cancer, Vol 19, Iss 1, Pp 1-10 (2019)
BMC Cancer, Vol 19, Iss 1, Pp 1-10 (2019)
BackgroundBlood-based methods using cell-free DNA (cfDNA) are under development as an alternative to existing screening tests. However, early-stage detection of cancer using tumor-derived cfDNA has proven challenging because of the small proportion o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d5ac7ac8fea1c37b4c91bf798c0a4eff
https://pubmed.ncbi.nlm.nih.gov/31443703
https://pubmed.ncbi.nlm.nih.gov/31443703
Autor:
Gabriel Otte, Mitch Bailey, Marvin Bertin, Signe Fransen, Tzu-Yu Liu, Loren Hansen, Catherina Tang, Gabriel E. Sanderson, Katherine E. Niehaus, Abe Tzou, Brandon White, Aarushi Sharma, Ajay Kannan, Riley Ennis, Yaping Liu, Erik Gafni, David H. Weinberg, James Cregg, Nathan Wan, Nathan Boley, Girish Putcha, Derek Bowen, Eric A. Ariazi, Imran S. Haque, Jennifer Pecson, John St. John, Brandon J. Rice, Leilani Young, Daniel Delubac, Adam Drake
Publikováno v:
Gastroenterology. 156:S-600
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5ba4940ae445effb5471db4266a9e069
https://doi.org/10.1016/s0016-5085(19)38396-9
https://doi.org/10.1016/s0016-5085(19)38396-9
Autor:
Ken Chen, Adam F. Dukes, Chris Harris, Mark D. Mason, Elizabeth L. Appelbaum, Jennifer Ivanovich, Justin T. Lolofie, Michael D. McLellan, Lei Chen, Benjamin J. Oberkfell, Lisa Cook, Jeremy Hoog, Devin P. Locke, Shunqiang Li, Jennifer S. Hodges, Scott M. Smith, Feiyu Du, Dong-Wei Shen, Amy Hawkins, Gabriel E. Sanderson, Rachel Abbott, Lucinda Fulton, John W. Wallis, Mark A. Watson, Sherri R. Davies, George M. Weinstock, Michelle D O'Laughlin, Richard K. Wilson, Joelle Kalicki, Jacqueline E. Snider, Joshua F. McMichael, Charles M. Perou, Heather K. Schmidt, Nathan D. Dees, Tammi L. Vickery, Jerry S. Reed, Glendoria Elliott, Robert S. Fulton, William Schierding, Li-li Lin, Robert J. Crowder, Timothy J. Ley, James M. Eldred, Josh B. Peck, Craig Pohl, Dominic M. Thompson, David J. Dooling, Paul J. Goodfellow, Michael C. Wendl, Vincent Magrini, Therese Guintoli, Katherine DeSchryver, Li Ding, Kelly E. Bernard, Kim D. Delehaunty, David E. Larson, Qunyuan Zhang, Kimberley A. Pape, Mark L. Cunningham, Matthew J. Ellis, Madeline E. Wiechert, Sean McGrath, Rebecca Aft, Ling Lin, Elaine R. Mardis, Jody S. Robinson, Catrina Fronick, Yu Long Tao, Daniel C. Koboldt
Publikováno v:
Nature
Massively parallel DNA sequencing technologies provide an unprecedented ability to screen entire genomes for genetic changes associated with tumor progression. Here we describe the genomic analyses of four DNA samples from an African-American patient
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2ff3de97864ce77af64853d93c8df3b
http://europepmc.org/articles/PMC2872544
http://europepmc.org/articles/PMC2872544
Autor:
Gabriel E. Sanderson, William E. Schroeder, Chris Harris, Gary Stiehr, Lynn K. Carmichael, Benjamin J. Ainscough, Shawn Leonard, Charles Lu, Ian T. Ferguson, James M. Eldred, Nathaniel G. Nutter, Amy Hawkins, Eric M. Clark, Allison A. Regier, Thomas P. Mooney, Todd Wylie, Elaine R. Mardis, Michael D. McLellan, Michael J. Kiwala, Malachi Griffith, Ken Chen, Joshua F. McMichael, Kyung H. Kim, Travis E. Abbott, Robert T. L. Long, Benjamin S. Abbott, Edward A. Belter, Indraniel Das, Richard W. Wohlstadter, Adam F. Dukes, Matthew B. Callaway, Feiyu Du, Vincent Magrini, Jason Walker, Benjamin J. Oberkfell, Nicole Maher, Zachary L. Skidmore, Cyriac Kandoth, Scott M. Smith, Christopher A. Miller, Jasreet Hundal, Xian Fan, David L. Morton, Todd G. Hepler, Brian R. Derickson, Christopher G. Maher, David J. Dooling, Craig Pohl, David E. Larson, James V. Weible, Xiaoqi Shi, Joshua Peck, Matthew R. Weil, Justin T. Lolofie, Adam C. Coffman, Nathan D. Dees, Li Ding, Anthony M. Brummett, Mark M. Burnett, William Schierding, Avinash Ramu, Richard K. Wilson, Obi L. Griffith, Daniel C. Koboldt
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 7, p e1004274 (2015)
PLoS Computational Biology
PLoS Computational Biology
In this work, we present the Genome Modeling System (GMS), an analysis information management system capable of executing automated genome analysis pipelines at a massive scale. The GMS framework provides detailed tracking of samples and data coupled
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2734038d15f6efe532d19f2b57747ecc
https://doaj.org/article/8bd43ecac4d44f7cbb8d1a284c28cdab
https://doaj.org/article/8bd43ecac4d44f7cbb8d1a284c28cdab
Autor:
Li Ding, Anthony M. Brummett, Peter Westervelt, Jason Walker, Ken Chen, Jonathan K. Schindler, Mark A. Watson, Jerry S. Reed, Timothy J. Ley, Lynn K. Carmichael, Kim D. Delehaunty, Craig Pohl, Daniel C. Link, John W. Wallis, Michael D. McLellan, Jacqueline E. Payton, Richard K. Wilson, Rhonda E. Ries, Heather Schmidt, Tammi L. Vickery, Sean McGrath, Jolynda V. Ivy, Chris Harris, David E. Larson, Sharon Heath, Eric M. Clark, Devin P. Locke, Rick Meyer, Joelle Kalicki, Vincent Magrini, Scott M. Smith, Jody S. Robinson, Yuzhu Tang, Todd Wylie, Rakesh Nagarajan, Carrie A. Haipek, Adam F. Dukes, Madeline E. Wiechert, Gabriel E. Sanderson, Feiyu Du, Michael H. Tomasson, David J. Dooling, Glendoria Elliott, William D. Shannon, Rachel Abbott, Lucinda Fulton, John F. DiPersio, Joshua F. McMichael, Jack Baty, Xiaoqi Shi, Joshua Peck, Timothy A. Graubert, Ling Lin, Elaine R. Mardis, Robert S. Fulton, James M. Eldred, Matthew J. Walter, Daniel C. Koboldt
Publikováno v:
The New England journal of medicine. 361(11)
The full complement of DNA mutations that are responsible for the pathogenesis of acute myeloid leukemia (AML) is not yet known.We used massively parallel DNA sequencing to obtain a very high level of coverage (approximately 98%) of a primary, cytoge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e4441d125247d497c210a41e22bb061
https://pubmed.ncbi.nlm.nih.gov/23715325
https://pubmed.ncbi.nlm.nih.gov/23715325