Zobrazeno 1 - 10
of 116
pro vyhledávání: '"G. Doak"'
Autor:
Sibel Kucukyildirim, Megan Behringer, Way Sung, Debra A. Brock, Thomas G. Doak, Hatice Mergen, David C. Queller, Joan E. Strassmann, Michael Lynch
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3445-3452 (2020)
We describe the rate and spectrum of spontaneous mutations for the social amoeba Dictyostelium discoideum, a key model organism in molecular, cellular, evolutionary and developmental biology. Whole-genome sequencing of 37 mutation accumulation lines
Externí odkaz:
https://doaj.org/article/d80aec1ac7624f66b6e138d8a83268b2
Autor:
R. Chelsea Nagy, Jennifer K. Balch, Erin K. Bissell, Megan E. Cattau, Nancy F. Glenn, Benjamin S. Halpern, Nayani Ilangakoon, Brian Johnson, Maxwell B. Joseph, Sergio Marconi, Catherine O’Riordan, James Sanovia, Tyson L. Swetnam, William R. Travis, Leah A. Wasser, Elizabeth Woolner, Phoebe Zarnetske, Mujahid Abdulrahim, John Adler, Grenville Barnes, Kristina J. Bartowitz, Rachael E. Blake, Sara P. Bombaci, Julien Brun, Jacob D. Buchanan, K. Dana Chadwick, Melissa S. Chapman, Steven S. Chong, Y. Anny Chung, Jessica R. Corman, Jannelle Couret, Erika Crispo, Thomas G. Doak, Alison Donnelly, Katharyn A. Duffy, Kelly H. Dunning, Sandra M. Duran, Jennifer W. Edmonds, Dawson E. Fairbanks, Andrew J. Felton, Christopher R. Florian, Daniel Gann, Martha Gebhardt, Nathan S. Gill, Wendy K. Gram, Jessica S. Guo, Brian J. Harvey, Katherine R. Hayes, Matthew R. Helmus, Robert T. Hensley, Kelly L. Hondula, Tao Huang, Wiley J. Hundertmark, Virginia Iglesias, Pierre‐Andre Jacinthe, Lara S. Jansen, Marta A. Jarzyna, Tiona M. Johnson, Katherine D. Jones, Megan A. Jones, Michael G. Just, Youssef O. Kaddoura, Aurora K. Kagawa‐Vivani, Aleya Kaushik, Adrienne B. Keller, Katelyn B. S. King, Justin Kitzes, Michael J. Koontz, Paige V. Kouba, Wai‐Yin Kwan, Jalene M. LaMontagne, Elizabeth A. LaRue, Daijiang Li, Bonan Li, Yang Lin, Daniel Liptzin, William Alex Long, Adam L. Mahood, Samuel S. Malloy, Sparkle L. Malone, Joseph M. McGlinchy, Courtney L. Meier, Brett A. Melbourne, Nathan Mietkiewicz, Jeffery T. Morisette, Moussa Moustapha, Chance Muscarella, John Musinsky, Ranjan Muthukrishnan, Kusum Naithani, Merrie Neely, Kari Norman, Stephanie M. Parker, Mariana Perez Rocha, Laís Petri, Colette A. Ramey, Sydne Record, Matthew W. Rossi, Michael SanClements, Victoria M. Scholl, Anna K. Schweiger, Bijan Seyednasrollah, Debjani Sihi, Kathleen R. Smith, Eric R. Sokol, Sarah A. Spaulding, Anna I. Spiers, Lise A. St. Denis, Anika P. Staccone, Kaitlin Stack Whitney, Diane M. Stanitski, Eva Stricker, Thilina D. Surasinghe, Sarah K. Thomsen, Patrisse M. Vasek, Li Xiaolu, Di Yang, Rong Yu, Kelsey M. Yule, Kai Zhu
Publikováno v:
Ecosphere, Vol 12, Iss 12, Pp n/a-n/a (2021)
Abstract It is a critical time to reflect on the National Ecological Observatory Network (NEON) science to date as well as envision what research can be done right now with NEON (and other) data and what training is needed to enable a diverse user co
Externí odkaz:
https://doaj.org/article/165f6e53481945bcbaa71d1794c0c87d
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 8, Iss 7, Pp 2523-2526 (2018)
Mutation is one of the most fundamental evolutionary forces. Studying variation in the mutation rate within and among closely-related species can help reveal mechanisms of genome divergence, but such variation is unstudied in the vast majority of org
Externí odkaz:
https://doaj.org/article/244ee1ae00e04bb5b03336c2f4bf7133
Autor:
Jean-Francois Gout, Yue Hao, Parul Johri, Olivier Arnaiz, Thomas G Doak, Simran Bhullar, Arnaud Couloux, Fréderic Guérin, Sophie Malinsky, Alexey Potekhin, Natalia Sawka, Linda Sperling, Karine Labadie, Eric Meyer, Sandra Duharcourt, Michael Lynch
Publikováno v:
Molecular Biology and Evolution. 40
Whole-genome duplications (WGDs) have shaped the gene repertoire of many eukaryotic lineages. The redundancy created by WGDs typically results in a phase of massive gene loss. However, some WGD–derived paralogs are maintained over long evolutionary
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8db602732ba7e907630d93b161a54f1c
https://doi.org/10.1093/molbev/msad107
https://doi.org/10.1093/molbev/msad107
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 6, Iss 7, Pp 2157-2163 (2016)
Mycobacterium smegmatis is a bacterium that is naturally devoid of known postreplicative DNA mismatch repair (MMR) homologs, mutS and mutL, providing an opportunity to investigate how the mutation rate and spectrum has evolved in the absence of a hig
Externí odkaz:
https://doaj.org/article/1c2af16ffddc4d6f922bdab37757b99a
Publikováno v:
Molecular Biology and Evolution. 39
Whole-genome duplications (WGDs) have occurred in many eukaryotic lineages. However, the underlying evolutionary forces and molecular mechanisms responsible for the long-term retention of gene duplicates created by WGDs are not well understood. We em
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::84a1c0ba89960597b2946edcc0e23f13
https://doi.org/10.1093/molbev/msac118
https://doi.org/10.1093/molbev/msac118
Autor:
Jiao, Pan, Weiyi, Li, Jiahao, Ni, Kun, Wu, Iain, Konigsberg, Caitlyn E, Rivera, Clayton, Tincher, Colin, Gregory, Xia, Zhou, Thomas G, Doak, Heewook, Lee, Yan, Wang, Xiang, Gao, Michael, Lynch, Hongan, Long
Publikováno v:
Molecular Biology and Evolution. 39
Because errors at the DNA level power pathogen evolution, a systematic understanding of the rate and molecular spectra of mutations could guide the avoidance and treatment of infectious diseases. We thus accumulated tens of thousands of spontaneous m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a38961e3a70793d25beb2b1637929678
https://doi.org/10.1093/molbev/msac081
https://doi.org/10.1093/molbev/msac081
Publikováno v:
Frontiers in Microbiology, Vol 7 (2016)
Diversity-generating retroelements (DGRs) are genetic cassettes that can produce massive protein sequence variation in prokaryotes. Presumably DGRs confer selective advantages to their hosts (bacteria or viruses) by generating variants of target gene
Externí odkaz:
https://doaj.org/article/417bd757f33349a2b7e2af698b328228
Publikováno v:
Genetics. 215:1107-1116
Organisms adapted to life in extreme habitats (extremophiles) can further our understanding of the mechanisms of genetic stability, particularly replication and repair. Despite the harsh environmental conditions they endure, these extremophiles repre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::974c5ecfe4b8218bf76d15de0427948e
https://doi.org/10.1534/genetics.120.303299
https://doi.org/10.1534/genetics.120.303299
Publikováno v:
Frontiers in Microbiology, Vol 6 (2015)
Metagenomics and other metaomics approaches (including metatranscriptomics) provide insights into the composition and function of microbial communities living in different environments or animal hosts. Metatranscriptomics research provides an unprece
Externí odkaz:
https://doaj.org/article/e9fdf79d1b744d30846724a923bc4d2a