Zobrazeno 1 - 10
of 47
pro vyhledávání: '"Görel Sundström"'
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-8 (2018)
Abstract Background Studies that aim at explaining phenotypes or disease susceptibility by genetic or epigenetic variants often rely on clustering methods to stratify individuals or samples. While statistical associations may point at increased risk
Externí odkaz:
https://doaj.org/article/150ada7a79144925b7e770cd7135f3f0
Autor:
Andreas N. Schneider, John Sundh, Görel Sundström, Kerstin Richau, Nicolas Delhomme, Manfred Grabherr, Vaughan Hurry, Nathaniel R. Street
Publikováno v:
mSystems, Vol 6, Iss 1 (2021)
ABSTRACT The health, growth, and fitness of boreal forest trees are impacted and improved by their associated microbiomes. Microbial gene expression and functional activity can be assayed with RNA sequencing (RNA-Seq) data from host samples. In contr
Externí odkaz:
https://doaj.org/article/1f0ed9d9056a4e8cb8f39137b1257016
Autor:
Nicolas Delhomme, Görel Sundström, Neda Zamani, Henrik Lantz, Yao-Cheng Lin, Torgeir R Hvidsten, Marc P Höppner, Patric Jern, Yves Van de Peer, Joakim Lundeberg, Manfred G Grabherr, Nathaniel R Street
Publikováno v:
PLoS ONE, Vol 10, Iss 9, p e0139080 (2015)
After performing de novo transcript assembly of >1 billion RNA-Sequencing reads obtained from 22 samples of different Norway spruce (Picea abies) tissues that were not surface sterilized, we found that assembled sequences captured a mix of plant, lic
Externí odkaz:
https://doaj.org/article/3657a32464e348579de10f9082deed29
Autor:
Marc P Hoeppner, Andrew Lundquist, Mono Pirun, Jennifer R S Meadows, Neda Zamani, Jeremy Johnson, Görel Sundström, April Cook, Michael G FitzGerald, Ross Swofford, Evan Mauceli, Behrooz Torabi Moghadam, Anna Greka, Jessica Alföldi, Amr Abouelleil, Lynne Aftuck, Daniel Bessette, Aaron Berlin, Adam Brown, Gary Gearin, Annie Lui, J Pendexter Macdonald, Margaret Priest, Terrance Shea, Jason Turner-Maier, Andrew Zimmer, Eric S Lander, Federica di Palma, Kerstin Lindblad-Toh, Manfred G Grabherr
Publikováno v:
PLoS ONE, Vol 9, Iss 3, p e91172 (2014)
The domestic dog, Canis familiaris, is a well-established model system for mapping trait and disease loci. While the original draft sequence was of good quality, gaps were abundant particularly in promoter regions of the genome, negatively impacting
Externí odkaz:
https://doaj.org/article/a00dababd8554f008848530283adc7b5
Publikováno v:
PLoS ONE, Vol 5, Iss 5, p e10512 (2010)
BACKGROUND: The opioid system is involved in reward and pain mechanisms and consists in mammals of four receptors and several peptides. The peptides are derived from four prepropeptide genes, PENK, PDYN, PNOC and POMC, encoding enkephalins, dynorphin
Externí odkaz:
https://doaj.org/article/0875ea6f4f49495a913b4e4711765298
Autor:
Andreas Schneider, Kerstin Richau, Nathaniel R. Street, Nicolas Delhomme, Manfred Grabherr, Görel Sundström, Vaughan Hurry, John Sundh
Microbial communities are major players in carbon and nitrogen cycling globally and are of particular importance for plant communities in the nutrient poor soils of boreal forests. Especially relevant are the fungal communities in the soil that inter
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a52a55429427d22eff999620f4bf8562
https://doi.org/10.5194/egusphere-egu21-7249
https://doi.org/10.5194/egusphere-egu21-7249
Autor:
Vaughan Hurry, Kerstin Richau, Andreas N. Schneider, John Sundh, Görel Sundström, Manfred Grabherr, Nathaniel R. Street, Nicolas Delhomme
Publikováno v:
mSystems
mSystems, Vol 6, Iss 1 (2021)
mSystems, Vol 6, Iss 1 (2021)
The health, growth, and fitness of boreal forest trees are impacted and improved by their associated microbiomes. Microbial gene expression and functional activity can be assayed with RNA sequencing (RNA-Seq) data from host samples. In contrast, phyl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::78079cda392a6cee4c20a06a6652a817
https://pub.epsilon.slu.se/24237/
https://pub.epsilon.slu.se/24237/
Autor:
Yao-Cheng, Lin, Jing, Wang, Nicolas, Delhomme, Bastian, Schiffthaler, Görel, Sundström, Andrea, Zuccolo, Björn, Nystedt, Torgeir R, Hvidsten, Amanda, de la Torre, Rosa M, Cossu, Marc P, Hoeppner, Henrik, Lantz, Douglas G, Scofield, Neda, Zamani, Anna, Johansson, Chanaka, Mannapperuma, Kathryn M, Robinson, Niklas, Mähler, Ilia J, Leitch, Jaume, Pellicer, Eung-Jun, Park, Marc, Van Montagu, Yves, Van de Peer, Manfred, Grabherr, Stefan, Jansson, Pär K, Ingvarsson, Nathaniel R, Street
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Significance We performed de novo, full-genome sequence analysis of two Populus species, North American quaking and Eurasian trembling aspen, that contain striking levels of genetic variation. Our results showed that positive and negative selection b
Autor:
Pär K. Ingvarsson, Neda Zamani, Björn Nystedt, Bastian Schiffthaler, Yao-Cheng Lin, Stefan Jansson, Niklas Mähler, Anna Johansson, Henrik Lantz, Manfred Grabherr, Chanaka Mannapperuma, Görel Sundström, Marc P. Hoeppner, Jaume Pellicer, Kathryn M. Robinson, Ilia J. Leitch, Eung-Jun Park, Rosa Maria Cossu, Nathaniel R. Street, Marc Van Montagu, Nicolas Delhomme, Jing Wang, Torgeir R. Hvidsten, Douglas G. Scofield, Andrea Zuccolo, Amanda R. De La Torre, Yves Van de Peer
Publikováno v:
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
The Populus genus is one of the major plant model systems, but genomic resources have thus far primarily been available for poplar species, and primarily Populus trichocarpa (Torr. & Gray), which was the first tree with a whole-genome assembly. To fu
Autor:
Lars Krogvold, Görel Sundström, Trond Buanes, Manfred Grabherr, Oskar Skog, Knut Dahl-Jørgensen, Olle Korsgren, Johnny Ludvigsson, Kristian F. Hanssen, Bjørn Edwin
Publikováno v:
Diabetes. 64:2506-2512
The understanding of the etiology of type 1 diabetes (T1D) remains limited. One objective of the Diabetes Virus Detection (DiViD) study was to collect pancreatic tissue from living subjects shortly after the diagnosis of T1D. Here we report the insul