Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci

Autor: Fan Han, Minal Jamsandekar, Mats E Pettersson, Leyi Su, Angela P Fuentes-Pardo, Brian W Davis, Dorte Bekkevold, Florian Berg, Michele Casini, Geir Dahle, Edward D Farrell, Arild Folkvord, Leif Andersson

Publikováno v: eLIFE
e61076
eLife
Han, F, Jamsandekar, M, Pettersson, M E, Su, L, Fuentes-Pardo, A, Davis, B, Bekkevold, D, Berg, F, Casini, M, Dahle, G, Farrell, E D, Folkvord, A & Andersson, L 2020, ' Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci ', eLife, vol. 9, e61076 . https://doi.org/10.7554/eLife.61076
eLife, Vol 9 (2020)

Atlantic herring is widespread in North Atlantic and adjacent waters and is one of the most abundant vertebrates on earth. This species is well suited to explore genetic adaptation due to minute genetic differentiation at selectively neutral loci. He

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::e194b72f9bf85b82e68c3fdf1e6e29ec
https://hdl.handle.net/11250/2725753

Predicting the future of our oceans-Evaluating genomic forecasting approaches in marine species.

Autor: Layton KKS; Department of Biology, University of Toronto Mississauga, Mississauga, Ontario, Canada.; School of Biological Sciences, University of Aberdeen, Aberdeen, UK., Brieuc MSO; Institute of Marine Research, Bergen, Norway., Castilho R; University of the Algarve, Faro, Portugal.; Centre for Marine Sciences, University of the Algarve, Faro, Portugal.; Pattern Institute, Faro, Portugal., Diaz-Arce N; AZTI Marine Research, Basque Research and Technology Alliance (BRTA), Sukarrieta, Spain., Estévez-Barcia D; Department of Fish and Shellfish, Greenland Institute of Natural Resources, Nuuk, Greenland., Fonseca VG; Centre for Environment, Fisheries and Aquaculture Science, Weymouth, UK., Fuentes-Pardo AP; Department of Immunology, Genetics and Pathology, SciLifeLab Data Centre, Uppsala University, Uppsala, Sweden., Jeffery NW; Bedford Institute of Oceanography, Fisheries and Oceans Canada, Dartmouth, Nova Scotia, Canada., Jiménez-Mena B; Section for Marine Living Resources, National Institute of Aquatic Resources, Technical University of Denmark, Silkeborg, Denmark., Junge C; Institute of Marine Research, Tromso, Norway., Kaufmann J; Marine Institute, Newport, Ireland., Leinonen T; Natural Resources Institute Finland, Helsinki, Finland., Maes SM; Flanders Research Institute for Agriculture, Fisheries and Food, Ostend, Belgium., McGinnity P; School of Biological, Earth & Environmental Sciences, University College Cork, Cork, Ireland., Reed TE; School of Biological, Earth & Environmental Sciences, University College Cork, Cork, Ireland., Reisser CMO; MARBEC, University of Montpellier, CNRS, IFREMER, IRD, Montpellier, France., Silva G; MARE-Marine and Environmental Sciences Centre/ARNET-Aquatic Research Network, ISPA-Instituto Universitário, Lisbon, Portugal., Vasemägi A; Swedish University of Agricultural Sciences, Drottningholm, Sweden.; Estonian University of Life Sciences, Tartu, Estonia., Bradbury IR; Northwest Atlantic Fisheries Centre, Fisheries and Oceans Canada, St. John's, Newfoundland and Labrador, Canada.

Publikováno v: Global change biology [Glob Chang Biol] 2024 Mar; Vol. 30 (3), pp. e17236.

Monitoring of species' genetic diversity in Europe varies greatly and overlooks potential climate change impacts.

Autor: Pearman PB; Department of Plant Biology and Ecology, Faculty of Sciences and Technology, University of the Basque Country UPV/EHU, Leioa, Spain. peter.b.pearman@gmail.com.; IKERBASQUE Basque Foundation for Science, Bilbao, Spain. peter.b.pearman@gmail.com.; BC3 Basque Center for Climate Change, Leioa, Spain. peter.b.pearman@gmail.com., Broennimann O; Department of Ecology and Evolution, Biophore, University of Lausanne, Lausanne, Switzerland.; Institute of Earth Surface Dynamics, Geopolis, University of Lausanne, Lausanne, Switzerland., Aavik T; Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia., Albayrak T; Science and Art Faculty, Department of Biology, Lab of Ornithology, Burdur Mehmet Akif Ersoy University, Burdur, Turkey., Alves PC; CIBIO-InBIO Laboratório Associado & Departamento de Biologia, Faculdade de Ciências do Porto, Campus de Vairão, Universidade do Porto, Vairão, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, Universidade do Porto, Vairão, Portugal.; EBM, Estação Biológica de Mértola, Mértola, Portugal., Aravanopoulos FA; Faculty of Agriculture, Forest Science and Natural Environment, Aristotle University of Thessaloniki, Thessaloniki, Greece., Bertola LD; Department of Biology, University of Copenhagen, Copenhagen, Denmark., Biedrzycka A; Institute of Nature Conservation, Polish Academy of Sciences, Kraków, Poland., Buzan E; Faculty of Mathematics, Natural Sciences, and Information Technologies, University of Primorska, Koper, Slovenia.; Faculty of Environmental Protection, Velenje, Slovenia., Cubric-Curik V; Department of Animal Science, University of Zagreb, Zagreb, Croatia., Djan M; Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia., Fedorca A; Department of Wildlife, National Institute for Research and Development in Forestry 'Marin Dracea', Brasov, Romania.; Department of Silviculture, Faculty of Silviculture and Forest Engineering, Transilvania University of Brasov, Brasov, Romania., Fuentes-Pardo AP; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Fussi B; Bavarian Office for Forest Genetics, Teisendorf, Germany., Godoy JA; Doñana Biological Station (EBD-CSIC), Seville, Spain., Gugerli F; Swiss Federal Research Institute WSL, Birmensdorf, Switzerland., Hoban S; Center for Tree Science, Morton Arboretum, Lisle, IL, USA., Holderegger R; Swiss Federal Research Institute WSL, Birmensdorf, Switzerland.; Department of Environmental Systems Sciences D-USYS, ETH Zürich, Zürich, Switzerland., Hvilsom C; Copenhagen Zoo, Frederiksberg, Denmark., Iacolina L; Faculty of Mathematics, Natural Sciences and Information Technologies, Department of Biodiversity, University of Primorska, Koper, Slovenia.; Department of Veterinary Medicine, University of Sassari, Sassari, Italy., Kalamujic Stroil B; Institute for Genetic Engineering and Biotechnology, University of Sarajevo, Sarajevo, Bosnia and Herzegovina., Klinga P; Faculty of Forestry, Technical University in Zvolen, Zvolen, Slovak Republic.; Department of Forest Ecology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Prague, Czech Republic., Konopiński MK; Institute of Nature Conservation, Polish Academy of Sciences, Kraków, Poland., Kopatz A; Norwegian Institute for Nature Research, Trondheim, Norway., Laikre L; Department of Zoology, Division of Population Genetics, Stockholm University, Stockholm, Sweden., Lopes-Fernandes M; Centre for Research in Anthropology, Lisbon, Portugal.; Institute for Nature Conservation and Forests, Lisbon, Portugal., McMahon BJ; UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland., Mergeay J; Research Institute for Nature and Forest, Geraardsbergen, Belgium.; Ecology, Evolution and Biodiversity Conservation, KU Leuven, Leuven, Belgium., Neophytou C; Institute of Silviculture, Department of Forest and Soil Sciences, University of Natural Resources and Life Sciences (BOKU), Vienna, Austria.; Department of Forest Nature Conservation, Forest Research Institute Baden-Württemberg, Freiburg, Germany., Pálsson S; Department of Biology, University of Iceland, Reykjavik, Iceland., Paz-Vinas I; Department of Biology, Colorado State University, Fort Collins, CO, USA., Posledovich D; Department of Zoology, Division of Population Genetics, Stockholm University, Stockholm, Sweden., Primmer CR; Faculty of Biological & Environmental Sciences, University of Helsinki, Helsinki, Finland., Raeymaekers JAM; Faculty of Biosciences and Aquaculture, Nord University, Bodø, Norway., Rinkevich B; Israel Oceanographic and Limnological Research, National Institute of Oceanography, Haifa, Israel., Rolečková B; Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic., Ruņģis D; Genetic Resource Centre, Latvian State Forest Research Institute 'Silava', Salaspils, Latvia., Schuerz L; Swiss Federal Research Institute WSL, Birmensdorf, Switzerland., Segelbacher G; Wildlife Ecology and Management, University Freiburg, Freiburg, Germany., Kavčič Sonnenschein K; Slovenian Forestry Institute, Ljubljana, Slovenia., Stefanovic M; Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia., Thurfjell H; Swedish Species Information Centre, Swedish University of Agricultural Sciences, Uppsala, Sweden., Träger S; Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany., Tsvetkov IN; Department of Forest Genetics, Physiology and Plantations, Forest Research Institute, Bulgarian Academy of Sciences, Sofia, Bulgaria., Velickovic N; Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia., Vergeer P; Plant Ecology and Nature Conservation Group, Wageningen University, Wageningen, the Netherlands., Vernesi C; Forest Ecology Unit, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy., Vilà C; Doñana Biological Station (EBD-CSIC), Seville, Spain., Westergren M; Slovenian Forestry Institute, Ljubljana, Slovenia., Zachos FE; Natural History Museum Vienna, Vienna, Austria.; Department of Evolutionary Biology, University of Vienna, Vienna, Austria.; Department of Genetics, University of the Free State, Bloemfontein, South Africa., Guisan A; Department of Ecology and Evolution, Biophore, University of Lausanne, Lausanne, Switzerland.; Institute of Earth Surface Dynamics, Geopolis, University of Lausanne, Lausanne, Switzerland., Bruford M; School of Biosciences, Cardiff University, Cardiff, UK.; Department of Biochemistry, Genetics and Molecular Biology, University of Pretoria, Pretoria, South Africa.

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A Long-Standing Hybrid Population Between Pacific and Atlantic Herring in a Subarctic Fjord of Norway.

Autor: Pettersson ME; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Fuentes-Pardo AP; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Rochus CM; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Enbody ED; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Bi H; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Väinölä R; Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland., Andersson L; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, Texas.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2023 May 05; Vol. 15 (5).

Functional genetic diversity in an exploited marine species and its relevance to fisheries management.

Autor: Petrou EL; School of Aquatic and Fishery Sciences, University of Washington, 1122 NE Boat Street, Seattle WA 98105, USA., Fuentes-Pardo AP; Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Rogers LA; Fisheries and Oceans Canada, 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6., Orobko M; Earth to Ocean Research Group, Department of Biological Sciences, Simon Fraser University, 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6., Tarpey C; School of Aquatic and Fishery Sciences, University of Washington, 1122 NE Boat Street, Seattle WA 98105, USA., Jiménez-Hidalgo I; School of Aquatic and Fishery Sciences, University of Washington, 1122 NE Boat Street, Seattle WA 98105, USA., Moss ML; Department of Anthropology, University of Oregon, Eugene, OR 97403, USA., Yang D; Department of Archaeology, Simon Fraser University, Education Building 9635, 8888 University Drive, Burnaby, British Columbia, Canada V5A 1S6., Pitcher TJ; University of British Columbia, Institute for the Oceans and Fisheries, Vancouver, British Columbia, Canada., Sandell T; Washington Department of Fish and Wildlife, 16018 Mill Creek Boulevard, Mill Creek, WA 98012-1541, USA., Lowry D; Washington Department of Fish and Wildlife, 1111 Washington Street SE, 6th Floor, Olympia, WA 98504-3150, USA., Ruzzante DE; Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4R2., Hauser L; School of Aquatic and Fishery Sciences, University of Washington, 1122 NE Boat Street, Seattle WA 98105, USA.

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