Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Frederic Mahé"'
Autor:
Stéphane Boivin, Frederic Mahé, Frédéric Debellé, Marjorie Pervent, Mathilde Tancelin, Marc Tauzin, Jerzy Wielbo, Sylvie Mazurier, Peter Young, Marc Lepetit
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
Legumes of the Fabeae tribe form nitrogen-fixing root nodules resulting from symbiotic interaction with the soil bacteria Rhizobium leguminosarum symbiovar viciae (Rlv). These bacteria are all potential symbionts of the Fabeae hosts but display varia
Externí odkaz:
https://doaj.org/article/c84a2218064f460985622e66f2f0b770
Autor:
Virginie Ravigné, Nathalie Becker, François Massol, Erwan Guichoux, Christophe Boury, Frédéric Mahé, Benoit Facon
Publikováno v:
Evolutionary Applications, Vol 15, Iss 10, Pp 1621-1638 (2022)
Abstract One promising avenue for reconciling the goals of crop production and ecosystem preservation consists in the manipulation of beneficial biotic interactions, such as between insects and microbes. Insect gut microbiota can affect host fitness
Externí odkaz:
https://doaj.org/article/5a691ae5866548d09eeeb07276442842
Autor:
Daniel Belstrøm, Florentin Constancias, Daniela I. Drautz-Moses, Stephan C. Schuster, Mark Veleba, Frédéric Mahé, Michael Givskov
Publikováno v:
npj Biofilms and Microbiomes, Vol 7, Iss 1, Pp 1-10 (2021)
Abstract The purpose of the present investigation was to characterize species-specific bacterial activity of the oral microbiota in periodontitis. We tested the hypotheses that chronic inflammation, i.e., periodontitis, associates with bacterial gene
Externí odkaz:
https://doaj.org/article/5fdfdd040ae744b292843a02e2b23a55
Autor:
Colomban de Vargas, Noan Le Bescot, Thibaut Pollina, Nicolas Henry, Sarah Romac, Sébastien Colin, Nils Haëntjens, Margaux Carmichael, Calixte Berger, David Le Guen, Johan Decelle, Frédéric Mahé, Julie Poulain, Emmanuel Malpot, Carole Beaumont, Michel Hardy, Damien Guiffant, Ian Probert, David F. Gruber, Andrew E. Allen, Gabriel Gorsky, Michael J. Follows, Xavier Pochon, Romain Troublé, B. B. Cael, Fabien Lombard, Emmanuel Boss, Manu Prakash, the Plankton Planet core team, Romain Bazile, Guillaume Bourdin, BB Cael, Roberto Casati, Sébastien Colin, Nils Haentjens, Adam Larson, Gilles Mirambeau, Clémentine Moulin, Anna Oddone, Christophe Prazuck, Vincent Raimbault, Clara Trellu, Romain Troublé
Publikováno v:
Frontiers in Marine Science, Vol 9 (2022)
In every liter of seawater there are between 10 and 100 billion life forms, mostly invisible, called marine plankton or marine microbiome, which form the largest and most dynamic ecosystem on our planet, at the heart of global ecological and economic
Externí odkaz:
https://doaj.org/article/da7eba1dc19e461695ff52bb2ac9d3bb
Autor:
Alexandra Schoenle, Manon Hohlfeld, Karoline Hermanns, Frédéric Mahé, Colomban de Vargas, Frank Nitsche, Hartmut Arndt
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Alexandra Schoenle et al. use DNA metabarcoding and cultivation-based surveys of 11 regions in the Pacific and Atlantic Oceans encompassing the bathyal, abyssal, and hadal zones to identify the role of deep-sea heterotrophic protists relative to othe
Externí odkaz:
https://doaj.org/article/a57e7e40067743dc99663acd79e8d5c2
Autor:
Fatima Zahra Maghnia, Younes Abbas, Frédéric Mahé, Benaissa Kerdouh, Estelle Tournier, Mohamed Ouadji, Pierre Tisseyre, Yves Prin, Naïma El Ghachtouli, Salah Eddine Bakkali Yakhlef, Robin Duponnois, Hervé Sanguin
Publikováno v:
PLoS ONE, Vol 12, Iss 11, p e0187758 (2017)
Soil fungi associated with plant roots, notably ectomycorrhizal (EcM) fungi, are central in above- and below-ground interactions in Mediterranean forests. They are a key component in soil nutrient cycling and plant productivity. Yet, major disturbanc
Externí odkaz:
https://doaj.org/article/c0d2acd735e4456aadc856b25aed44f4
Publikováno v:
PeerJ, Vol 4, p e2584 (2016)
Background VSEARCH is an open source and free of charge multithreaded 64-bit tool for processing and preparing metagenomics, genomics and population genomics nucleotide sequence data. It is designed as an alternative to the widely used USEARCH tool (
Externí odkaz:
https://doaj.org/article/c6afe7dddd824879a8d6f6c853df9c22
Autor:
Evguenia Kopylova, Jose A. Navas-Molina, Céline Mercier, Zhenjiang Zech Xu, Frédéric Mahé, Yan He, Hong-Wei Zhou, Torbjørn Rognes, J. Gregory Caporaso, Rob Knight
Publikováno v:
mSystems, Vol 1, Iss 1 (2016)
ABSTRACT Sequence clustering is a common early step in amplicon-based microbial community analysis, when raw sequencing reads are clustered into operational taxonomic units (OTUs) to reduce the run time of subsequent analysis steps. Here, we evaluate
Externí odkaz:
https://doaj.org/article/75b0acec23d8460984a172ced1fd9c07
Publikováno v:
PeerJ, Vol 4, p e1692 (2016)
Discovery of novel diversity in high-throughput sequencing studies is an important aspect in environmental microbial ecology. To evaluate the effects that amplicon clustering methods have on the discovery of novel diversity, we clustered an environme
Externí odkaz:
https://doaj.org/article/cf3edeff9de946b09cec1a755ba91047
Publikováno v:
PeerJ, Vol 3, p e1420 (2015)
Previously we presented Swarm v1, a novel and open source amplicon clustering program that produced fine-scale molecular operational taxonomic units (OTUs), free of arbitrary global clustering thresholds and input-order dependency. Swarm v1 worked wi
Externí odkaz:
https://doaj.org/article/0070b26d494e4f79b89431279861a6cd