Hybridization breaks species barriers in long-term coevolution of a cyanobacterial population.

Autor: Birzu G; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA., Muralidharan HS; Department of Computer Science, University of Maryland, College Park, MD 20742, USA., Goudeau D; DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA., Malmstrom RR; DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA., Fisher DS; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA., Bhaya D; Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA.

Publikováno v: BioRxiv : the preprint server for biology [bioRxiv] 2023 Jun 07. Date of Electronic Publication: 2023 Jun 07.

Population genetics of polymorphism and divergence in rapidly evolving populations.

Autor: Melissa MJ; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Department of Physics, Harvard University, Cambridge, MA 02138, USA.; Quantitative Biology Initiative, Harvard University, Cambridge, MA 02138, USA.; NSF-Simons Center for Mathematical and Statistical Analysis of Biology, Harvard University, Cambridge, MA 02138, USA., Good BH; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA.; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA., Fisher DS; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA.; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA., Desai MM; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Department of Physics, Harvard University, Cambridge, MA 02138, USA.; Quantitative Biology Initiative, Harvard University, Cambridge, MA 02138, USA.; NSF-Simons Center for Mathematical and Statistical Analysis of Biology, Harvard University, Cambridge, MA 02138, USA.

Publikováno v: Genetics [Genetics] 2022 Jul 30; Vol. 221 (4).

Fundamental limits on the rate of bacterial growth and their influence on proteomic composition.

Autor: Belliveau NM; Department of Biology, Howard Hughes Medical Institute, University of Washington, Seattle, WA 98105, USA., Chure G; Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125, USA., Hueschen CL; Department of Chemical Engineering, Stanford University, Stanford, CA 94305, USA., Garcia HG; Department of Molecular Cell Biology and Department of Physics, University of California Berkeley, Berkeley, CA 94720, USA., Kondev J; Department of Physics, Brandeis University, Waltham, MA 02453, USA., Fisher DS; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA., Theriot JA; Department of Biology, Howard Hughes Medical Institute, University of Washington, Seattle, WA 98105, USA. Electronic address: jtheriot@uw.edu., Phillips R; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA; Department of Physics, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address: phillips@pboc.caltech.edu.

Publikováno v: Cell systems [Cell Syst] 2021 Sep 22; Vol. 12 (9), pp. 924-944.e2. Date of Electronic Publication: 2021 Jul 01.

Optimisation strategies for directed evolution without sequencing.

Autor: James, Jessica¹ (AUTHOR), Towers, Sebastian¹ (AUTHOR), Foerster, Jakob¹ (AUTHOR), Steel, Harrison¹ (AUTHOR) harrison.steel@eng.ox.ac.uk

Publikováno v: PLoS Computational Biology. 12/19/2024, Vol. 20 Issue 12, p1-18. 18p.

A high-resolution two-step evolution experiment in yeast reveals a shift from pleiotropic to modular adaptation.

Autor: Kinsler, Grant^1,2 (AUTHOR) grantkinsler@gmail.com, Li, Yuping^3,4 (AUTHOR), Sherlock, Gavin³ (AUTHOR), Petrov, Dmitri A.¹ (AUTHOR)

Publikováno v: PLoS Biology. 12/5/2024, Vol. 22 Issue 12, p1-36. 36p.