PatternLab for proteomics: a tool for differential shotgun proteomics

Autor: Yates John R, Chen Emily I, Fischer Juliana SG, Carvalho Paulo C, Barbosa Valmir C

Publikováno v: BMC Bioinformatics, Vol 9, Iss 1, p 316 (2008)

Abstract Background A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu et al. demonstrated a method to perform semi-relative protein quantitation in shotgun proteomics data

Externí odkaz: https://doaj.org/article/01495238191440f89924437cc126cb3c

GO Explorer: A gene-ontology tool to aid in the interpretation of shotgun proteomics data.

Autor: Carvalho PC; Systems Engineering and Computer Science Program, Federal University of Rio de Janeiro, Brazil.; Department of Chemical Physiology, The Scripps Research Institute, La Jolla, USA., Fischer JS; Department of Chemical Physiology, The Scripps Research Institute, La Jolla, USA.; Chemistry Institute, Federal University of Rio de Janeiro, and Rio de Janeiro Proteomics Network, Rio de Janeiro, Brazil., Chen EI; Department of Chemical Physiology, The Scripps Research Institute, La Jolla, USA.; Department of Pharmacological Sciences, Stony Brook University, Stony Brook, NY, USA., Domont GB; Chemistry Institute, Federal University of Rio de Janeiro, and Rio de Janeiro Proteomics Network, Rio de Janeiro, Brazil., Carvalho MG; Carlos Chagas Filho Biophysics Institute, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil., Degrave WM; Oswaldo Cruz Institute, Laboratory for Functional Genomics and Bioinformatics, Rio de Janeiro, Brazil., Yates JR 3rd; Department of Chemical Physiology, The Scripps Research Institute, La Jolla, USA., Barbosa VC; Systems Engineering and Computer Science Program, Federal University of Rio de Janeiro, Brazil.

Publikováno v: Proteome science [Proteome Sci] 2009 Feb 24; Vol. 7, pp. 6. Date of Electronic Publication: 2009 Feb 24.