Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Fiodorovaite, Marija"'
Autor:
Goltermann, Lise, Zhang, Meiqin, Ebbensgaard, Anna Elisabeth, Fiodorovaite, Marija, Yavari, Niloofar, Løbner-Olesen, Anders, Nielsen, Peter E.
Publikováno v:
Goltermann, L, Zhang, M, Ebbensgaard, A E, Fiodorovaite, M, Yavari, N, Løbner-Olesen, A & Nielsen, P E 2022, ' Effects of LPS Composition in Escherichia coli on Antibacterial Activity and Bacterial Uptake of Antisense Peptide-PNA Conjugates ', Frontiers in Microbiology, vol. 13, 877377 . https://doi.org/10.3389/fmicb.2022.877377
The physical and chemical properties of the outer membrane of Gram-negative bacteria including Escherichia coli have a significant impact on the antibacterial activity and uptake of antibiotics, including antimicrobial peptides and antisense peptide-
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 13: Table S3. Oligonucleotides.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9c80ea0577f0604a74f88d095696472e
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 4: Figure S3. Cas2/3-mediated DNA degradation. (A) Preparation of linearized plasmid substrates. (B) Cas2/3 degradation of Cascade-bound linearized DNA targets.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c98f4165c47ff94b12ed0d85abeb49f
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 5: Figure S4. Cas2/3 cleavage profile of Cascade-bound target dsDNA. Denaturing polyacrylamide gels of Cas2/3-cleaved oligoduplex labelled on either the non-target (A) or target (B) DNA strand. (C) Cleavage products mapped within the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1aa4af9fc6cd899fa518df1912a397e5
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 3: Figure S2. R-loop formed by WT Cascade. (A) Denaturing polyacrylamide gel of oligoduplex footprints. (B) R-loop within SP-CC oligoduplex sequence.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::38cf67ebd33c1947f89e3bc13233bc8d
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 9: Figure S8. R-loops formed by WT and extended Cascade upon interaction with protospacers of different length. (A) Denaturing polyacrylamide gel of DNA duplex footprints. (B) Cleavage pattern within the non-target strand sequences.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76a9dbef4b121013c98d497050c152cd
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 8: Figure S7. Cas2/3 cleavage of target DNA bound to truncated and extended Cascade complexes in the presence of ATP. Denaturing polyacrylamide gels of Cas2/3-cleaved DNA target labelled on either the non-target (A) or target (B) DNA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::65b3db22ad7bc5064b83ba10a65d424c
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 6: Figure S5. R-loops formed by Cascade complexes containing truncated or extended spacers. Denaturing polyacrylamide gels of DNA duplex footprints after treatment with KMnO4 for a 60 s (A) or 20 s (B). (C) Cleavage pattern within the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c31d67dba5238fcb4392cce40b7fa37
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 7: Figure S6. Cas2/3 cleavage of target DNA bound to truncated and extended Cascade complexes in the absence of ATP. Denaturing polyacrylamide gels of Cas2/3-cleaved DNA target labelled on either the non-target (A) or target (B) DNA s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::550fef0d2109f3a9e697fba8b25f2678
Autor:
Tuminauskaite, Donata, Danguole Norkunaite, Fiodorovaite, Marija, Sarunas Tumas, Songailiene, Inga, Giedre Tamulaitiene, Sinkunas, Tomas
Additional file 2: Figure S1. Cas2/3 nuclease and ATPase activity dependence on divalent metal ions. (A) Cas2/3-catalysed hydrolysis of ssDNA in the presence of different divalent metals. (B) Cas2/3-catalysed hydrolysis of ATP in the presence of diff
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::17e55541406bc9ebdf63f1d9aeec1fc1