Boosting predictive models and augmenting patient data with relevant genomic and pathway information

Autor: Buosi, Samuele, Timilsina, Mohan, Torrente, Maria, Provencio, Mariano, Fey, Dirk, Nováček, Vít

Publikováno v: In Computers in Biology and Medicine May 2024 174

Synergy between imputed genetic pathway and clinical information for predicting recurrence in early stage non-small cell lung cancer

Autor: Timilsina, Mohan, Fey, Dirk, Buosi, Samuele, Janik, Adrianna, Costabello, Luca, Carcereny, Enric, Abreu, Delvys Rodrıguez, Cobo, Manuel, Castro, Rafael López, Bernabé, Reyes, Minervini, Pasquale, Torrente, Maria, Provencio, Mariano, Nováček, Vít

Publikováno v: In Journal of Biomedical Informatics August 2023 144

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Systems Biology in ELIXIR: modelling in the spotlight:[version 1; peer review: 1 approved, 2 approved with reservations]

Autor: Martins dos Santos, Vitor, Anton, Mihail, Szomolay, Barbara, Ostaszewski, Marek, Arts, Ilja, Benfeitas, Rui, Dominguez del Angel, Victoria, Ferk, Polonca, Fey, Dirk, Goble, Carole, Golebiewski, Martin, Gruden, Kristina, Heil, Katharina F., Hermjakob, Henning, Kahlem, Pascal, Klapa, Maria I., Koehorst, Jasper, Kolodkin, Alexey, Kutmon, Martina, Leskošek, Brane, Moretti, Sébastien, Müller, Wolfgang, Pagni, Marco, Rezen, Tadeja, Rocha, Miguel, Rozman, Damjana, Šafránek, David, Sheriff, Rahuman S. Malik, Suarez diez, Maria, Van steen, Kristel, Westerhoff, Hans V, Wittig, Ulrike, Wolstencroft, Katherine, Zupanic, Anze, Evelo, Chris T., Hancock, John M.

Publikováno v: Martins dos Santos, V, Anton, M, Szomolay, B, Ostaszewski, M, Arts, I, Benfeitas, R, Dominguez del Angel, V, Ferk, P, Fey, D, Goble, C, Golebiewski, M, Gruden, K, Heil, K F, Hermjakob, H, Kahlem, P, Klapa, M I, Koehorst, J, Kolodkin, A, Kutmon, M, Leskošek, B, Moretti, S, Müller, W, Pagni, M, Rezen, T, Rocha, M, Rozman, D, Šafránek, D, Sheriff, R S M, Suarez diez, M, Van steen, K, Westerhoff, H V, Wittig, U, Wolstencroft, K, Zupanic, A, Evelo, C T & Hancock, J M 2022, ' Systems Biology in ELIXIR: modelling in the spotlight : [version 1; peer review: 1 approved, 2 approved with reservations] ', F1000Research, vol. 11, pp. 1265 . https://doi.org/10.12688/f1000research.126734.1

In this white paper, we describe the founding of a new ELIXIR Community - the Systems Biology Community - and its proposed future contributions to both ELIXIR and the broader community of systems biologists in Europe and worldwide. The Community beli

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______3818::54f4d2840cec816afa9c064a95f3b0cb
https://doi.org/10.12688/f1000research.126734.1

Pseudophosphatase STYX modulates cell-fate decisions and cell migration by spatiotemporal regulation of ERK1/2

Autor: Reiterer, Veronika, Fey, Dirk, Kolch, Walter, Kholodenko, Boris N., Farhan, Hesso

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America, 2013 Jul . 110(31), 12512-12512.

Externí odkaz: https://www.jstor.org/stable/42712637