Zobrazeno 1 - 10
of 191
pro vyhledávání: '"Ferran Garcia-PIchel"'
Autor:
Patrick Kut, Ferran Garcia-Pichel
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-9 (2024)
Abstract Environmental parameters vary in time, and variability is inherent in soils, where microbial activity follows precipitation pulses. The expanded pulse-reserve paradigm (EPRP) contends that arid soil microorganisms have adaptively diversified
Externí odkaz:
https://doaj.org/article/6b3e49b77b9c451bab80ac1bcbcc5d27
Autor:
Henry Secaira-Morocho, Abhinav Chede, Luis Gonzalez-de-Salceda, Ferran Garcia-Pichel, Qiyun Zhu
Publikováno v:
Cell Reports, Vol 43, Iss 6, Pp 114268- (2024)
Summary: We investigate the distribution and evolution of prokaryotic cell size based on a compilation of 5,380 species. Size spans four orders of magnitude, from 100 nm (Mycoplasma) to more than 1 cm (Thiomargarita); however, most species congregate
Externí odkaz:
https://doaj.org/article/f2e655ab182c4d52af245d134059d83f
Publikováno v:
ISME Communications, Vol 2, Iss 1, Pp 1-9 (2022)
Abstract Microbial communities are typically characterized by some degree of self-organization. In biological soil crust (biocrust) communities, vertical organization of resident populations at the mm scale is driven by organismal adaptations to phys
Externí odkaz:
https://doaj.org/article/86fee339ebb24d33a35cee88db1c292b
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-10 (2022)
Some bacteria act as pathogens or predators of other bacteria, but their impact in natural settings is often unclear. Here, Bethany et al. describe a new type of obligate, intracellular predatory bacterium of widespread distribution that preys on soi
Externí odkaz:
https://doaj.org/article/4b5d87fc57aa4d6bbe74f1071848ff3c
Autor:
Marc W. Van Goethem, Andrew R. Osborn, Benjamin P. Bowen, Peter F. Andeer, Tami L. Swenson, Alicia Clum, Robert Riley, Guifen He, Maxim Koriabine, Laura Sandor, Mi Yan, Chris G. Daum, Yuko Yoshinaga, Thulani P. Makhalanyane, Ferran Garcia-Pichel, Axel Visel, Len A. Pennacchio, Ronan C. O’Malley, Trent R. Northen
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Marc Van Goethem et al. combine short- and long-read sequencing from biocrust samples to report nearly 3,000 biosynthetic gene clusters (BGCs) encoding microbial secondary metabolites. Their results demonstrate the advantage of integrated metatranscr
Externí odkaz:
https://doaj.org/article/eae224afa2b747cc9f684dcc3d7db239
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-6 (2021)
Measurement(s) Phylogenetic Analysis • computational phylogenetic analysis • Data Quality Technology Type(s) Maximum Likelihood Estimation • digital curation Sample Characteristic - Organism Cyanobacteria/Melainabacteria group Machine-accessibl
Externí odkaz:
https://doaj.org/article/aa14aaff781140f7a8baf81cc0437581
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-8 (2021)
Abstract Background The determination of taxon-specific composition of microbiomes by combining high-throughput sequencing of ribosomal genes with phyloinformatic analyses has become routine in microbiology and allied sciences. Systematic biases to t
Externí odkaz:
https://doaj.org/article/a44f7e06552c4a38968a1caa16861cfc
Publikováno v:
iScience, Vol 25, Iss 6, Pp 104361- (2022)
Summary: Bacteria sometimes hedge their survival bets by concurrently activating response circuits leading to different phenotypes in isogenic populations. We show that the cyanobacterium Nostoc punctiforme responds to UV-A by concurrently producing
Externí odkaz:
https://doaj.org/article/fc992161a83d45758c74a061fc17b2cb
Publikováno v:
Microbiome, Vol 7, Iss 1, Pp 1-12 (2019)
Abstract Background Biological soil crusts (biocrusts) are a key component of arid land ecosystems, where they render critical services such as soil surface stabilization and nutrient fertilization. The bundle-forming, filamentous, non-nitrogen-fixin
Externí odkaz:
https://doaj.org/article/adeb1a1b92cf4bceb81422edec35721e
Autor:
Huansheng Cao, Yohei Shimura, Morgan M. Steffen, Zhou Yang, Jingrang Lu, Allen Joel, Landon Jenkins, Masanobu Kawachi, Yanbin Yin, Ferran Garcia-Pichel
Publikováno v:
mBio, Vol 11, Iss 3 (2020)
ABSTRACT Water bloom development due to eutrophication constitutes a case of niche specialization among planktonic cyanobacteria, but the genomic repertoire allowing bloom formation in only some species has not been fully characterized. We posited th
Externí odkaz:
https://doaj.org/article/1d44710fb7014d16ae805a2204999692