Zobrazeno 1 - 4
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pro vyhledávání: '"Ferdinando Randisi"'
Thymine dimers are a major mutagenic photoproduct induced by UV radiation. While they have been the subject of extensive theoretical and experimental investigations, questions of how DNA supercoiling affects local defect properties, or, conversely, h
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8628b9b39b62206542824f5122232e9b
https://ora.ox.ac.uk/objects/uuid:b6f2ccf9-4ef9-4b6e-99de-8a0181447f8f
https://ora.ox.ac.uk/objects/uuid:b6f2ccf9-4ef9-4b6e-99de-8a0181447f8f
We consider a coarse-grained (CG) model with pairwise interactions, suitable to describe low-density solutions of star-branched polymers of functionality $f$. Each macromolecule is represented by a CG molecule with $(f+1)$ interaction sites, which ca
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97255ae01cc619bb50bc58b4af9e1a51
We study the behaviour of double-stranded RNA under twist and tension using oxRNA, a recently developed coarse-grained model of RNA. Introducing explicit salt-dependence into the model allows us to directly compare our results to data from recent sin
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::38fba3b60038639a7503ba5003b65216
https://doi.org/10.1063/1.4933066
https://doi.org/10.1063/1.4933066
Autor:
Ferdinando Randisi, Thomas E. Ouldridge, Petr Šulc, Majid Mosayebi, Eyal Nir, Roman Tsukanov, Flavio Romano, John S. Schreck, Jonathan P. K. Doye, Ard A. Louis, Benedict E. K. Snodin
Publikováno v:
The Journal of Chemical Physics. 142:234901
We introduce an extended version of oxDNA, a coarse-grained model of deoxyribonucleic acid (DNA) designed to capture the thermodynamic, structural, and mechanical properties of single- and double-stranded DNA. By including explicit major and minor gr