Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Felipe Llinares López"'
Autor:
Gunjan Baid, Daniel E. Cook, Kishwar Shafin, Taedong Yun, Felipe Llinares-López, Quentin Berthet, Anastasiya Belyaeva, Armin Töpfer, Aaron M. Wenger, William J. Rowell, Howard Yang, Alexey Kolesnikov, Waleed Ammar, Jean-Philippe Vert, Ashish Vaswani, Cory Y. McLean, Maria Nattestad, Pi-Chuan Chang, Andrew Carroll
Publikováno v:
Nature Biotechnology.
Circular consensus sequencing with Pacific Biosciences (PacBio) technology generates long (10-25 kilobases), accurate 'HiFi' reads by combining serial observations of a DNA molecule into a consensus sequence. The standard approach to consensus genera
Publikováno v:
Foundations and Trends® in Machine Learning
Graph-structured data are an integral part of many application domains, including chemoinformatics, computational biology, neuroimaging, and social network analysis. Over the last two decades, numerous graph kernels, i.e. kernel functions between gra
Publikováno v:
Nature methods.
Protein sequence alignment is a key component of most bioinformatics pipelines to study the structures and functions of proteins. Aligning highly divergent sequences remains, however, a difficult task that current algorithms often fail to perform acc
Autor:
Felipe Llinares-López, Aline Cuénod, Olivier Dubuis, Bastian Rieck, Susanne Graf, Michael Osthoff, Kirstine K. Søgaard, Caroline Weis, Adrian Egli, Maximilian Brackmann, Michael Oberle, Karsten M. Borgwardt, Claudia Lang
Early administration of effective antimicrobial treatments is critical for the outcome of infections. Antimicrobial resistance testing enables the selection of optimal antibiotic treatments, but current culture-based techniques take up to 72 hours. W
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2c48f7f259206c65d55bdbc18903d96b
https://doi.org/10.1101/2020.07.30.228411
https://doi.org/10.1101/2020.07.30.228411
Autor:
Dean A. Bodenham, Damian Roqueiro, Felipe Llinares-López, Karsten M. Borgwardt, Laetitia Papaxanthos
Publikováno v:
Bioinformatics, 35 (15)
Bioinformatics
Bioinformatics
Combinatorial association mapping aims to assess the statistical association of higher-order interactions of genetic markers with a phenotype of interest. This article presents combinatorial association mapping (CASMAP), a software package that lever
Publikováno v:
Analyzing Network Data in Biology and Medicine
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::352d69a556fa426266c04dd6b61e4b49
https://hdl.handle.net/20.500.11850/390151
https://hdl.handle.net/20.500.11850/390151
Among the data structures commonly used in machine learning, graphs are arguably one of the most general. Graphs allow the modelling of complex objects, each of which can be annotated by metadata. Nonetheless, seemingly simple questions, such as dete
Publikováno v:
Bioinformatics
Bioinformatics, 34 (3)
Bioinformatics, 34 (3)
Measuring the similarity of graphs is a fundamental step in the analysis of graphstructured data, which is omnipresent in computational biology. Graph kernels have been proposed as a powerful and efficient approach to this problem of graph comparison
Autor:
Mahito Sugiyama, Dominik G. Grimm, Dean A. Bodenham, Udo Gieraths, Felipe Llinares-López, Karsten M. Borgwardt, Beth A. Rowan
Publikováno v:
Bioinformatics
Bioinformatics, 31 (12)
Bioinformatics, 31 (12)
Bioinformatics, 31 (12)
ISSN:1367-4803
ISSN:1460-2059
ISSN:1367-4803
ISSN:1460-2059