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The Canadian VirusSeq Data Portal & Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.

Autor: Gill EE; Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada., Jia B; Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada., Murall CL; Department of Microbiology and Immunology, McGill University, Montreal, QC, Canada.; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Poujol R; Research Centre, Montréal Heart Institute, Montréal, QC, Canada., Anwar MZ; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada., John NS; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada., Richardsson J; Ontario Institute for Cancer Research, Toronto, ON, Canada., Hobb A; DNAstack, Toronto, ON, Canada., Olabode AS; Department of Pathology and Laboratory Medicine, Western University, ON Canada., Lepsa A; Ontario Institute for Cancer Research, Toronto, ON, Canada., Duggan AT; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Tyler AD; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., N'Guessan A; Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montreal, QC, Canada.; McGill Genome Centre, McGill University, Montréal, QC, Canada., Kachru A; Ontario Institute for Cancer Research, Toronto, ON, Canada., Chan B; Ontario Institute for Cancer Research, Toronto, ON, Canada., Yoshida C; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Yung CK; Indoc Systems, Toronto, ON, Canada.; Ontario Institute for Cancer Research, Toronto, ON, Canada., Bujold D; Department of Human Genetics, McGill University, Montréal, QC, Canada.; Canadian Centre for Computational Genomics, Montréal, QC, Canada., Andric D; Ontario Institute for Cancer Research, Toronto, ON, Canada., Su E; Ontario Institute for Cancer Research, Toronto, ON, Canada., Griffiths EJ; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada., Van Domselaar G; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Jolly GW; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Ward HKE; DNAstack, Toronto, ON, Canada., Feher H; Ontario Institute for Cancer Research, Toronto, ON, Canada., Baker J; Ontario Institute for Cancer Research, Toronto, ON, Canada., Simpson JT; Ontario Institute for Cancer Research, Toronto, ON, Canada., Uddin J; Ontario Institute for Cancer Research, Toronto, ON, Canada., Ragoussis J; McGill Genome Centre, McGill University, Montréal, QC, Canada., Eubank J; Ontario Institute for Cancer Research, Toronto, ON, Canada., Fritz JH; Department of Microbiology and Immunology, McGill Research Center on Complex Traits (MRCCT), Dahdaleh Institute of Genomic Medicine (DIGM), McGill University, Montréal, QC, Canada., Gálvez JH; Ontario Institute for Cancer Research, Toronto, ON, Canada., Fang K; DNAstack, Toronto, ON, Canada., Cullion K; Ontario Institute for Cancer Research, Toronto, ON, Canada., Rivera L; Ontario Institute for Cancer Research, Toronto, ON, Canada., Xiang L; Ontario Institute for Cancer Research, Toronto, ON, Canada., Croxen MA; Alberta Precision Laboratories, Public Health Laboratory, Edmonton, AB, Canada.; Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, AB, Canada.; Li Ka Shing Institute of Virology, University of Alberta, Edmonton, AB, Canada.; Women and Children's Health Research Institute, University of Alberta, Edmonton, AB, Canada., Shiell M; Ontario Institute for Cancer Research, Toronto, ON, Canada., Prystajecky N; British Columbia Centre for Disease Control Public Health Laboratory, Vancouver, BC Canada.; Department of Pathology and Laboratory Medicine, Faculty of Medicine, University of British Columbia, Vancouver, BC, Canada., Quirion PO; Canadian Centre for Computational Genomics, Montréal, QC, Canada., Bajari R; Ontario Institute for Cancer Research, Toronto, ON, Canada., Rich S; Ontario Institute for Cancer Research, Toronto, ON, Canada., Mubareka S; Sunnybrook Research Institute; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada., Moreira S; Université de Montréal, Montréal, QC, Canada., Cain S; Ontario Institute for Cancer Research, Toronto, ON, Canada., Sutcliffe SG; Department of Microbiology and Immunology, McGill University, Montréal, QC, Canada., Kraemer SA; Aquatic Contaminants Research Division, ECCC, Montréal, QC, Canada.; McGill Genome Centre, McGill University, Montréal, QC, Canada., Joly Y; Centre of Genomics and Policy, McGill University, Montréal, QC, Canada., Alturmessov Y; Ontario Institute for Cancer Research, Toronto, ON, Canada., Consortium C; Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.; Department of Microbiology and Immunology, McGill University, Montreal, QC, Canada.; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.; Research Centre, Montréal Heart Institute, Montréal, QC, Canada.; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada.; Ontario Institute for Cancer Research, Toronto, ON, Canada.; DNAstack, Toronto, ON, Canada.; Department of Pathology and Laboratory Medicine, Western University, ON Canada.; Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montreal, QC, Canada.; McGill Genome Centre, McGill University, Montréal, QC, Canada.; Indoc Systems, Toronto, ON, Canada.; Department of Human Genetics, McGill University, Montréal, QC, Canada.; Canadian Centre for Computational Genomics, Montréal, QC, Canada.; Department of Microbiology and Immunology, McGill Research Center on Complex Traits (MRCCT), Dahdaleh Institute of Genomic Medicine (DIGM), McGill University, Montréal, QC, Canada.; Alberta Precision Laboratories, Public Health Laboratory, Edmonton, AB, Canada.; Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, AB, Canada.; Li Ka Shing Institute of Virology, University of Alberta, Edmonton, AB, Canada.; Women and Children's Health Research Institute, University of Alberta, Edmonton, AB, Canada.; British Columbia Centre for Disease Control Public Health Laboratory, Vancouver, BC Canada.; Department of Pathology and Laboratory Medicine, Faculty of Medicine, University of British Columbia, Vancouver, BC, Canada.; Sunnybrook Research Institute; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada.; Université de Montréal, Montréal, QC, Canada.; Department of Microbiology and Immunology, McGill University, Montréal, QC, Canada.; Aquatic Contaminants Research Division, ECCC, Montréal, QC, Canada.; Centre of Genomics and Policy, McGill University, Montréal, QC, Canada.; Michael Smith Laboratories and Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.; Genome Canada, 150 Metcalfe Street, Suite 2100, Ottawa, ON, Canada.; Research Centre, Montréal Heart Institute, Montréal, QC, Canada.; Mila-Québec AI institute, Montréal, QC, Canada.; Molecular Epidemiology and Evolutionary Genetics, BC Centre for Excellence in HIV/AIDS, Vancouver, BC, Canada.; Infectious Diseases, Department of Medicine, University of British Columbia, Vancouver, BC, Canada.; Bioinformatics Programme, University of British Columbia, Vancouver, BC, Canada.; Department of Mathematics, Simon Fraser University, Burnaby, BC, Canada.; Centre for Health Genomics and Informatics, University of Calgary, Calgary, AB, Canada.; Department of Medical BioPhysics, University of Toronto, ON, Canada.; Department of Zoology & Biodiversity Research Centre, University of British Columbia, Vancouver BC Canada., Consortium C; Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.; Department of Microbiology and Immunology, McGill University, Montreal, QC, Canada.; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.; Research Centre, Montréal Heart Institute, Montréal, QC, Canada.; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada.; Ontario Institute for Cancer Research, Toronto, ON, Canada.; DNAstack, Toronto, ON, Canada.; Department of Pathology and Laboratory Medicine, Western University, ON Canada.; Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montreal, QC, Canada.; McGill Genome Centre, McGill University, Montréal, QC, Canada.; Indoc Systems, Toronto, ON, Canada.; Department of Human Genetics, McGill University, Montréal, QC, Canada.; Canadian Centre for Computational Genomics, Montréal, QC, Canada.; Department of Microbiology and Immunology, McGill Research Center on Complex Traits (MRCCT), Dahdaleh Institute of Genomic Medicine (DIGM), McGill University, Montréal, QC, Canada.; Alberta Precision Laboratories, Public Health Laboratory, Edmonton, AB, Canada.; Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, AB, Canada.; Li Ka Shing Institute of Virology, University of Alberta, Edmonton, AB, Canada.; Women and Children's Health Research Institute, University of Alberta, Edmonton, AB, Canada.; British Columbia Centre for Disease Control Public Health Laboratory, Vancouver, BC Canada.; Department of Pathology and Laboratory Medicine, Faculty of Medicine, University of British Columbia, Vancouver, BC, Canada.; Sunnybrook Research Institute; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada.; Université de Montréal, Montréal, QC, Canada.; Department of Microbiology and Immunology, McGill University, Montréal, QC, Canada.; Aquatic Contaminants Research Division, ECCC, Montréal, QC, Canada.; Centre of Genomics and Policy, McGill University, Montréal, QC, Canada.; Michael Smith Laboratories and Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.; Genome Canada, 150 Metcalfe Street, Suite 2100, Ottawa, ON, Canada.; Research Centre, Montréal Heart Institute, Montréal, QC, Canada.; Mila-Québec AI institute, Montréal, QC, Canada.; Molecular Epidemiology and Evolutionary Genetics, BC Centre for Excellence in HIV/AIDS, Vancouver, BC, Canada.; Infectious Diseases, Department of Medicine, University of British Columbia, Vancouver, BC, Canada.; Bioinformatics Programme, University of British Columbia, Vancouver, BC, Canada.; Department of Mathematics, Simon Fraser University, Burnaby, BC, Canada.; Centre for Health Genomics and Informatics, University of Calgary, Calgary, AB, Canada.; Department of Medical BioPhysics, University of Toronto, ON, Canada.; Department of Zoology & Biodiversity Research Centre, University of British Columbia, Vancouver BC Canada., Fiume M; DNAstack, Toronto, ON, Canada., Snutch TP; Michael Smith Laboratories and Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada., Bell C; Genome Canada, 150 Metcalfe Street, Suite 2100, Ottawa, ON, Canada., Lopez-Correa C; Genome Canada, 150 Metcalfe Street, Suite 2100, Ottawa, ON, Canada., Hussin JG; Département de Biochimie et Médecine Moléculaire, Université de Montréal, Montreal, QC, Canada.; Research Centre, Montréal Heart Institute, Montréal, QC, Canada.; Mila-Québec AI institute, Montréal, QC, Canada., Joy JB; Molecular Epidemiology and Evolutionary Genetics, BC Centre for Excellence in HIV/AIDS, Vancouver, BC, Canada.; Infectious Diseases, Department of Medicine, University of British Columbia, Vancouver, BC, Canada.; Bioinformatics Programme, University of British Columbia, Vancouver, BC, Canada., Colijn C; Department of Mathematics, Simon Fraser University, Burnaby, BC, Canada., Gordon PMK; Centre for Health Genomics and Informatics, University of Calgary, Calgary, AB, Canada., Hsiao WWL; Centre for Infectious Disease Genomics and One Health, Faculty of Health Sciences, Simon Fraser University, Burnaby, BC, Canada., Poon AFY; Department of Pathology and Laboratory Medicine, Western University, ON Canada., Knox NC; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada., Courtot M; Ontario Institute for Cancer Research, Toronto, ON, Canada.; Department of Medical BioPhysics, University of Toronto, ON, Canada., Stein L; Ontario Institute for Cancer Research, Toronto, ON, Canada., Otto SP; Department of Zoology & Biodiversity Research Centre, University of British Columbia, Vancouver BC Canada., Bourque G; Department of Human Genetics, McGill University, Montréal, QC, Canada.; Canadian Centre for Computational Genomics, Montréal, QC, Canada., Shapiro BJ; Department of Microbiology and Immunology, McGill University, Montréal, QC, Canada., Brinkman FSL; Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.

Publikováno v: ArXiv [ArXiv] 2024 May 08. Date of Electronic Publication: 2024 May 08.