Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Fatema-Zahra M. Rashid"'
Autor:
Fatema-Zahra M. Rashid, Frédéric G. E. Crémazy, Andreas Hofmann, David Forrest, David C. Grainger, Dieter W. Heermann, Remus T. Dame
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-25 (2023)
Abstract Nucleoid associated proteins (NAPs) maintain the architecture of bacterial chromosomes and regulate gene expression. Thus, their role as transcription factors may involve three-dimensional chromosome re-organisation. While this model is supp
Externí odkaz:
https://doaj.org/article/e5591af993724439831c95bd12cafc31
Autor:
Benjamin R. Gilbert, Zane R. Thornburg, Vinson Lam, Fatema-Zahra M. Rashid, John I. Glass, Elizabeth Villa, Remus T. Dame, Zaida Luthey-Schulten
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
JCVI-syn3A is a genetically minimal bacterial cell, consisting of 493 genes and only a single 543 kbp circular chromosome. Syn3A’s genome and physical size are approximately one-tenth those of the model bacterial organism Escherichia coli’s, and
Externí odkaz:
https://doaj.org/article/275f892b8aea4872ababbebf2f3bc710
Autor:
Fatema‐Zahra M. Rashid, Remus T. Dame
Publikováno v:
Molecular Microbiology.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3ce4b87a79b46ea0eeaa2c05b00700eb
https://doi.org/10.1111/mmi.15062
https://doi.org/10.1111/mmi.15062
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2516
The three-dimensional structure of the chromosome is encoded within its sequence and regulates activities such as replication and transcription. This necessitates the study of the spatial organization of the chromosome in relation to the underlying s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::504861a2511ca40019366e48e69cc35d
https://pubmed.ncbi.nlm.nih.gov/35922618
https://pubmed.ncbi.nlm.nih.gov/35922618
HI-NESS: a family of genetically encoded DNA labels based on a bacterial nucleoid-associated protein
Autor:
Patrick Voskamp, Daphne E. C. Boer, Monica Varela Alvarez, Martijn S. Luijsterburg, Fatema-Zahra M Rashid, Frédéric Crémazy, Daan J.W. Brocken, Thomas S Shimizu, Joachim Goedhart, Remus T. Dame, Annemarie H. Meijer, Michiel van der Vaart, Eike K. Mahlandt, Anneloes Blok, Bram Henneman
Publikováno v:
Nucleic Acids Research, 50(2). OXFORD UNIV PRESS
Nucleic Acids Research, 50(2). Oxford University Press (OUP)
Nucleic Acids Research, 50(2)
Nucleic Acids Research, 50(2):e10. Oxford University Press
Nucleic Acids Research
Nucleic Acids Research, 50(2). Oxford University Press (OUP)
Nucleic Acids Research, 50(2)
Nucleic Acids Research, 50(2):e10. Oxford University Press
Nucleic Acids Research
The interplay between three-dimensional chromosome organisation and genomic processes such as replication and transcription necessitates in vivo studies of chromosome dynamics. Fluorescent organic dyes are often used for chromosome labelling in vivo.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fba901b9bbc62518f82a6e59a9e16dd8
http://hdl.handle.net/1887/3563888
http://hdl.handle.net/1887/3563888
Publikováno v:
Nature Reviews Genetics, 21, 227-242. Springer Science and Business Media LLC
Bacterial chromosomes are folded to compact DNA and facilitate cellular processes. Studying model bacteria has revealed aspects of chromosome folding that are applicable to many species. Primarily controlled by nucleoid-associated proteins, chromosom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::230c6e2ca35ab286189bc2e896bef3f1
http://hdl.handle.net/1887/3248592
http://hdl.handle.net/1887/3248592
Publikováno v:
Nature reviews. Genetics. 21(4)
Bacterial chromosomes are folded to compact DNA and facilitate cellular processes. Studying model bacteria has revealed aspects of chromosome folding that are applicable to many species. Primarily controlled by nucleoid-associated proteins, chromosom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::73830a38453292fe04dc7c65f0f05cef
https://pubmed.ncbi.nlm.nih.gov/31767998
https://pubmed.ncbi.nlm.nih.gov/31767998
Publikováno v:
Biophysical Journal. 120:317a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b48717fdbf876f884d0c4072dbcd0bd7
https://doi.org/10.1016/j.bpj.2020.11.2008
https://doi.org/10.1016/j.bpj.2020.11.2008
Autor:
Elizabeth Villa, Vinson Lam, Zaida Luthey-Schulten, Remus T. Dame, Benjamin R. Gilbert, Fatema Zahra M. Rashid, Zane R. Thornburg
Publikováno v:
Biophysical Journal. 120:222a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9cf6d58a9b0b877dd585191c75cec2b1
https://doi.org/10.1016/j.bpj.2020.11.1486
https://doi.org/10.1016/j.bpj.2020.11.1486
Autor:
Frédéric G, Crémazy, Fatema-Zahra M, Rashid, James R, Haycocks, Lisa E, Lamberte, David C, Grainger, Remus T, Dame
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1837
The spatial organization of genomes is based on their hierarchical compartmentalization in topological domains. There is growing evidence that bacterial genomes are organized into insulated domains similar to the Topologically Associating Domains (TA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::8d920d6669663bf4da22d0a26f899422
https://pubmed.ncbi.nlm.nih.gov/30109602
https://pubmed.ncbi.nlm.nih.gov/30109602