Whole genome sequencing and the application of a SNP panel reveal primary evolutionary lineages and genomic variation in the lion (Panthera leo)

Autor: L. D. Bertola, M. Vermaat, F. Lesilau, M. Chege, P. N. Tumenta, E. A. Sogbohossou, O. D. Schaap, H. Bauer, B. D. Patterson, P. A. White, H. H. de Iongh, J. F. J. Laros, K. Vrieling

Publikováno v: BMC Genomics, Vol 23, Iss 1, Pp 1-15 (2022)

Abstract Background Previous phylogeographic studies of the lion (Panthera leo) have improved our insight into the distribution of genetic variation, as well as a revised taxonomy which now recognizes a northern (Panthera leo leo) and a southern (Pan

Externí odkaz: https://doaj.org/article/979f73f6cd674792a057977416a32197

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A Pipeline and Recommendations for Population and Individual Diagnostic SNP Selection in Non-Model Species.

Autor: Armstrong EE; School of Biological Sciences, Washington State University, Pullman, Washington, USA.; Department of Evolution, Ecology and Organismal Biology, University of California, Riverside, Riverside, California, USA., Li C; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA., Campana MG; Smithsonian's National Zoo and Conservation Biology Institute, Washington, DC, USA., Ferrari T; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA., Kelley JL; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, California, USA., Petrov DA; Department of Biology, Stanford University, Stanford, California, USA.; Chan Zuckerberg BioHub, San Francisco, California, USA.; Program for Conservation Genomics, Center for Computational, Evolutionary, and Human Genomics, Stanford, California, USA., Solari KA; Department of Biology, Stanford University, Stanford, California, USA., Mooney JA; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA.

Publikováno v: Molecular ecology resources [Mol Ecol Resour] 2024 Nov 29, pp. e14048. Date of Electronic Publication: 2024 Nov 29.