Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Fátima Sánchez Barreiro"'
Autor:
Vanessa C. Bieker, Paul Battlay, Bent Petersen, Xin Sun, Jonathan Wilson, Jaelle C. Brealey, François Bretagnolle, Kristin Nurkowski, Chris Lee, Fátima Sánchez Barreiro, Gregory L. Owens, Jacqueline Y. Lee, Fabian L. Kellner, Lotte van Boheeman, Shyam Gopalakrishnan, Myriam Gaudeul, Heinz Mueller-Schaerer, Suzanne Lommen, Gerhard Karrer, Bruno Chauvel, Yan Sun, Bojan Kostantinovic, Love Dalén, Péter Poczai, Loren H. Rieseberg, M. Thomas P. Gilbert, Kathryn A. Hodgins, Michael D. Martin
Publikováno v:
Science Advances
Bieker, V C, Battlay, P, Petersen, B, Sun, X, Wilson, J, Brealey, J C, Bretagnolle, F, Nurkowski, K, Lee, C, Barreiro, F S, Owens, G L, Lee, J Y, Kellner, F L, van Boheeman, L, Gopalakrishnan, S, Gaudeul, M, Mueller-Schaerer, H, Lommen, S, Karrer, G, Chauvel, B, Sun, Y, Kostantinovic, B, Dalén, L, Poczai, P, Rieseberg, L H, Gilbert, M T P, Hodgins, K A & Martin, M D 2022, ' Uncovering the genomic basis of an extraordinary plant invasion ', Science Advances, vol. 8, no. 34, eabo5115 . https://doi.org/10.1126/sciadv.abo5115
Bieker, V C, Battlay, P, Petersen, B, Sun, X, Wilson, J, Brealey, J C, Bretagnolle, F, Nurkowski, K, Lee, C, Barreiro, F S, Owens, G L, Lee, J Y, Kellner, F L, van Boheeman, L, Gopalakrishnan, S, Gaudeul, M, Mueller-Schaerer, H, Lommen, S, Karrer, G, Chauvel, B, Sun, Y, Kostantinovic, B, Dalén, L, Poczai, P, Rieseberg, L H, Gilbert, M T P, Hodgins, K A & Martin, M D 2022, ' Uncovering the genomic basis of an extraordinary plant invasion ', Science Advances, vol. 8, no. 34, eabo5115 . https://doi.org/10.1126/sciadv.abo5115
Invasive species are a key driver of the global biodiversity crisis, but the drivers of invasiveness, including the role of pathogens, remain debated. We investigated the genomic basis of invasiveness in Ambrosia artemisiifolia (common ragweed), intr
Autor:
Love Dalén, Tomas Marques-Bonet, M. Thomas P. Gilbert, Filipe G. Vieira, Daniela C. Kalthoff, Yannis Patramanis, Shyam Gopalakrishnan, Guojie Zhang, Ashot Margaryan, Jazmín Ramos-Madrigal, Michael V. Westbury, Yoshan Moodley, Oliver A. Ryder, Marc de Manuel, Marta Maria Ciucani, Fátima Sánchez-Barreiro, Zena L. Timmons, Thomas Sicheritz-Pontén
Publikováno v:
Sánchez-Barreiro, F, Gopalakrishnan, S, Ramos-Madrigal, J, Westbury, M V, de Manuel, M, Margaryan, A, Ciucani, M M, Vieira, F G, Patramanis, Y, Kalthoff, D C, Timmons, Z, Sicheritz-Pontén, T, Dalén, L, Ryder, O A, Zhang, G, Marques-Bonet, T, Moodley, Y & Gilbert, M T P 2021, ' Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros ( Ceratotherium simum ) ', Molecular Ecology, vol. 30, no. 23, pp. 6355-6369 . https://doi.org/10.1111/mec.16043
Molecular Ecology
Digital.CSIC. Repositorio Institucional del CSIC
instname
Molecular Ecology
Digital.CSIC. Repositorio Institucional del CSIC
instname
Large vertebrates are extremely sensitive to anthropogenic pressure, and their populations are declining fast. The white rhinoceros (Ceratotherium simum) is a paradigmatic case: this African megaherbivore has suffered a remarkable decline in the last
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f2996c686c201f6727cf1f18fdf7445
https://curis.ku.dk/portal/da/publications/historical-population-declines-prompted-significant-genomic-erosion-in-the-northern-and-southern-white-rhinoceros-ceratotherium-simum(fbb6465a-ade6-48ea-b652-8be1d5cc1e3b).html
https://curis.ku.dk/portal/da/publications/historical-population-declines-prompted-significant-genomic-erosion-in-the-northern-and-southern-white-rhinoceros-ceratotherium-simum(fbb6465a-ade6-48ea-b652-8be1d5cc1e3b).html
Autor:
David A. Duchêne, Robert R. Dunn, Peter D. Heintzman, Linda G. R. Bruins-van Sonsbeek, Kees Rookmaaker, Love Dalén, Sergey Vartanyan, Pierre-Olivier Antoine, Holly Heiniger, Joshua D. Kapp, Mikkel-Holger S. Sinding, M. Thomas P. Gilbert, Chentao Yang, Johanna von Seth, Shyam Gopalakrishnan, Beth Shapiro, Nicolas Dussex, Shanlin Liu, Tom van der Valk, Irina V. Kirillova, Michael William Bruford, Kieren J. Mitchell, Cynthia C. Steiner, Alan Cooper, Binia De Cahsan, Tomas Marques-Bonet, Fátima Sánchez-Barreiro, Michael V. Westbury, Lei Chen, Guanliang Meng, Adrian M. Lister, Remi André-Olsen, Oliver A. Ryder, Pavel A. Kosintsev, Eline D. Lorenzen, Ashot Margaryan, Guojie Zhang, Chunxue Guo, Yoshan Moodley
Publikováno v:
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Cell
Digital.CSIC. Repositorio Institucional del CSIC
instname
Cell, Elsevier, 2021, 184, pp.4874-4885.e16. ⟨10.1016/j.cell.2021.07.032⟩
Liu, S, Westbury, M V, Dussex, N, Mitchell, K J, Sinding, M H S, Heintzman, P D, Duchêne, D A, Kapp, J D, von Seth, J, Heiniger, H, Sánchez-Barreiro, F, Margaryan, A, André-Olsen, R, De Cahsan, B, Meng, G, Yang, C, Chen, L, van der Valk, T, Moodley, Y, Rookmaaker, K, Bruford, M W, Ryder, O, Steiner, C, Sonsbeek, L G R B, Vartanyan, S, Guo, C, Cooper, A, Kosintsev, P, Kirillova, I, Lister, A M, Marques-Bonet, T, Gopalakrishnan, S, Dunn, R R, Lorenzen, E D, Shapiro, B, Zhang, G, Antoine, P O, Dalén, L & Gilbert, M T P 2021, ' Ancient and modern genomes unravel the evolutionary history of the rhinoceros family ', Cell, vol. 184, no. 19, pp. 4874-4885.e16 . https://doi.org/10.1016/j.cell.2021.07.032
Universitat Autònoma de Barcelona
Cell
Digital.CSIC. Repositorio Institucional del CSIC
instname
Cell, Elsevier, 2021, 184, pp.4874-4885.e16. ⟨10.1016/j.cell.2021.07.032⟩
Liu, S, Westbury, M V, Dussex, N, Mitchell, K J, Sinding, M H S, Heintzman, P D, Duchêne, D A, Kapp, J D, von Seth, J, Heiniger, H, Sánchez-Barreiro, F, Margaryan, A, André-Olsen, R, De Cahsan, B, Meng, G, Yang, C, Chen, L, van der Valk, T, Moodley, Y, Rookmaaker, K, Bruford, M W, Ryder, O, Steiner, C, Sonsbeek, L G R B, Vartanyan, S, Guo, C, Cooper, A, Kosintsev, P, Kirillova, I, Lister, A M, Marques-Bonet, T, Gopalakrishnan, S, Dunn, R R, Lorenzen, E D, Shapiro, B, Zhang, G, Antoine, P O, Dalén, L & Gilbert, M T P 2021, ' Ancient and modern genomes unravel the evolutionary history of the rhinoceros family ', Cell, vol. 184, no. 19, pp. 4874-4885.e16 . https://doi.org/10.1016/j.cell.2021.07.032
Only five species of the once-diverse Rhinocerotidae remain, making the reconstruction of their evolutionary history a challenge to biologists since Darwin. We sequenced genomes from five rhinoceros species (three extinct and two living), which we co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42ea1bcd34d5f86867796277f1ed5b37
https://ddd.uab.cat/record/248978
https://ddd.uab.cat/record/248978
Autor:
Aikaterini Glykou, Peter Jordan, Marta Maria Ciucani, Anne Birgitte Gotfredsen, Xenia Keighley, Kerstin Lidén, Hans Ahlgren, Morten Tange Olsen, Paul Szpak, Lesley Howse, Fátima Sánchez Barreiro, Maiken Hemme Bro-Jørgensen
Publikováno v:
Keighley, X, Bro-Jørgensen, M H, Ahlgren, H, Szpak, P, Ciucani, M M, Sánchez Barreiro, F, Howse, L, Gotfredsen, A B, Glykou, A, Jordan, P, Lidén, K & Olsen, M T 2021, ' Predicting sample success for large-scale ancient DNA studies on marine mammals ', Molecular Ecology Resources, vol. 21, no. 4, pp. 1149-1166 . https://doi.org/10.1111/1755-0998.13331
Molecular Ecology Resources
Molecular Ecology Resources, 21(4), 1149-1166. Wiley
Molecular Ecology Resources
Molecular Ecology Resources, 21(4), 1149-1166. Wiley
In recent years, nonhuman ancient DNA studies have begun to focus on larger sample sizes and whole genomes, offering the potential to reveal exciting and hitherto unknown answers to ongoing biological and archaeological questions. However, one major
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::630371ecbcf90ff3c74b232cf369057f
https://curis.ku.dk/ws/files/272236683/1755_0998.13331.pdf
https://curis.ku.dk/ws/files/272236683/1755_0998.13331.pdf
Autor:
Nathan Wales, Michael D. Martin, Vanessa Carina Bieker, Marie Brunier, Jacob Agerbo Rasmussen, Fátima Sánchez Barreiro
Publikováno v:
Bieker, V C, Barreiro, F S, Rasmussen, J A, Brunier, M, Wales, N & Martin, M D 2020, ' Metagenomic analysis of historical herbarium specimens reveals a postmortem microbial community ', Molecular Ecology Resources, vol. 20, no. 5, pp. 1206-1219 . https://doi.org/10.1111/1755-0998.13174
Molecular Ecology Resources
Molecular Ecology Resources
Advances in DNA extraction and next-generation sequencing have made a vast number of historical herbarium specimens available for genomic investigation. These specimens contain not only genomic information from the individual plants themselves, but a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d5d3512ae15034a1ba912beda9865f78
https://eprints.whiterose.ac.uk/159923/8/1755_0998.13174.pdf
https://eprints.whiterose.ac.uk/159923/8/1755_0998.13174.pdf
Autor:
Senthilvel K. S. S. Nathan, M. Thomas P. Gilbert, A. V. Protopopov, Eline D. Lorenzen, Love Dalén, Benoit Goossens, Eske Willerslev, Sergey Vartanyan, Fátima Sánchez-Barreiro, Olga Potapova, Hervé Bocherens, Guojie Zhang, David W. G. Stanton, David Díez-del-Molino, Marcin Kierczak, Oliver A. Ryder, Irina V. Kirillova, Beth Shapiro, Anders Götherström, Joshua D. Kapp, Stefan Prost, Nicolas Dussex, Mikkel-Holger S. Sinding, Peter D. Heintzman, Yvonne L. Chan, F. K. Shidlovskiy, Sergey Fedorov, Johannes van der Plicht, Adrian M. Lister, Edana Lord
Publikováno v:
Lord, E, Dussex, N, Kierczak, M, Díez-del-Molino, D, Ryder, O A, Stanton, D W G, Gilbert, M T P, Sánchez-Barreiro, F, Zhang, G, Sinding, M H S, Lorenzen, E D, Willerslev, E, Protopopov, A, Shidlovskiy, F, Fedorov, S, Bocherens, H, Nathan, S K S S, Goossens, B, van der Plicht, J, Chan, Y L, Prost, S, Potapova, O, Kirillova, I, Lister, A M, Heintzman, P D, Kapp, J D, Shapiro, B, Vartanyan, S, Götherström, A & Dalén, L 2020, ' Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros ', Current Biology, vol. 30, no. 19, pp. 3871-3879, e1-e7 . https://doi.org/10.1016/j.cub.2020.07.046
Current Biology
Current Biology, 30(19), 3871-3879.e7. CELL PRESS
Current Biology
Current Biology, 30(19), 3871-3879.e7. CELL PRESS
Ancient DNA has significantly improved our understanding of the evolution and population history of extinct megafauna. However, few studies have used complete ancient genomes to examine species responses to climate change prior to extinction. The woo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::639f4214b2c1a129073dfb34d92cf2bc
http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-4091
http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-4091
Autor:
Marta Maria Ciucani, Oliver A. Ryder, Jazmín Ramos-Madrigal, Tomas Marques-Bonet, Yannis Patramanis, Zena L. Timmons, Ashot Margaryan, Love Dalén, Daniela C. Kalthoff, Yoshan Moodley, Marc de Manuel, Shyam Gopalakrishnan, Michael V. Westbury, Thomas Sicheritz-Pontén, Guojie Zhang, Fátima Sánchez Barreiro, Filipe G. Vieira, Marcus Thomas Pius Gilbert
Publikováno v:
SSRN Electronic Journal.
Large vertebrates are extremely sensitive to anthropogenic pressures, and their populations are declining fast. The white rhinoceros (Ceratotherium simum) is a paradigmatic case: this African megaherbivore suffered a remarkable population reductio
Publikováno v:
Trends in Ecology & Evolution
Many species have undergone dramatic population size declines over the past centuries. Although stochastic genetic processes during and after such declines are thought to elevate the risk of extinction, comparative analyses of genomic data from sever
Autor:
Benjamin K. Blackman, Melis Akman, Ray H. B. Watson, Kristen J. Gremillion, M. Thomas P. Gilbert, Fátima Sánchez Barreiro, Bruce D. Smith, Nathan Wales
Publikováno v:
Evolutionary Applications
Wales, N, Akman, M, Watson, R H B, Sánchez Barreiro, F, Smith, B D, Gremillion, K J, Gilbert, M T P & Blackman, B K 2019, ' Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication and improvement ', Evolutionary Applications, vol. 12, no. 1, pp. 38-53 . https://doi.org/10.1111/eva.12594
Wales, Nathan; Akman, Melis; Watson, Ray H. B; Sanchez Barreiro, Fatima; Smith, Bruce D; Gremillion, Kristen J; et al.(2018). Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication and improvement. Evolutionary Applications. doi: 10.1111/eva.12594. UC Berkeley: UC Berkeley Library. Retrieved from: http://www.escholarship.org/uc/item/0x60d3kz
Wales, N, Akman, M, Watson, R H B, Sánchez Barreiro, F, Smith, B D, Gremillion, K J, Gilbert, M T P & Blackman, B K 2019, ' Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication and improvement ', Evolutionary Applications, vol. 12, no. 1, pp. 38-53 . https://doi.org/10.1111/eva.12594
Wales, Nathan; Akman, Melis; Watson, Ray H. B; Sanchez Barreiro, Fatima; Smith, Bruce D; Gremillion, Kristen J; et al.(2018). Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication and improvement. Evolutionary Applications. doi: 10.1111/eva.12594. UC Berkeley: UC Berkeley Library. Retrieved from: http://www.escholarship.org/uc/item/0x60d3kz
Here, we report a comprehensive paleogenomic study of archaeological and ethnographic sunflower remains that provides significant new insights into the process of domestication of this important crop. DNA from both ancient and historic contexts yield
Autor:
Filipe G. Vieira, Michael D. Martin, James Haile, M. Thomas P. Gilbert, Fátima Sánchez Barreiro, Nathan Wales
Publikováno v:
Molecular Ecology Resources. 17:209-220
Population genetic studies of non-model organisms frequently employ reduced representation library (RRL) methodologies, many of which rely on protocols in which genomic DNA is digested by one or more restriction enzymes. However, because high molecul