Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Ezekiel J Maier"'
Autor:
Jaleal S Sanjak, Erin M McAuley, Justin Raybern, Richard Pinkham, Jacob Tarnowski, Nicole Miko, Bridgette Rasmussen, Christian J Manalo, Michael Goodson, Blake Stamps, Bryan Necciai, Shanmuga Sozhamannan, Ezekiel J Maier
Publikováno v:
JMIR Public Health and Surveillance, Vol 10, Pp e54750-e54750 (2024)
Abstract BackgroundThe COVID-19 pandemic highlighted the need for pathogen surveillance systems to augment both early warning and outbreak monitoring/control efforts. Community wastewater samples provide a rapid and accurate source of environmental
Externí odkaz:
https://doaj.org/article/c6ce5c3ca251410ca9197e3e5cdfcb4a
Autor:
Nathan D. Olson, Justin Wagner, Jennifer McDaniel, Sarah H. Stephens, Samuel T. Westreich, Anish G. Prasanna, Elaine Johanson, Emily Boja, Ezekiel J. Maier, Omar Serang, David Jáspez, José M. Lorenzo-Salazar, Adrián Muñoz-Barrera, Luis A. Rubio-Rodríguez, Carlos Flores, Konstantinos Kyriakidis, Andigoni Malousi, Kishwar Shafin, Trevor Pesout, Miten Jain, Benedict Paten, Pi-Chuan Chang, Alexey Kolesnikov, Maria Nattestad, Gunjan Baid, Sidharth Goel, Howard Yang, Andrew Carroll, Robert Eveleigh, Mathieu Bourgey, Guillaume Bourque, Gen Li, ChouXian Ma, LinQi Tang, YuanPing Du, ShaoWei Zhang, Jordi Morata, Raúl Tonda, Genís Parra, Jean-Rémi Trotta, Christian Brueffer, Sinem Demirkaya-Budak, Duygu Kabakci-Zorlu, Deniz Turgut, Özem Kalay, Gungor Budak, Kübra Narcı, Elif Arslan, Richard Brown, Ivan J. Johnson, Alexey Dolgoborodov, Vladimir Semenyuk, Amit Jain, H. Serhat Tetikol, Varun Jain, Mike Ruehle, Bryan Lajoie, Cooper Roddey, Severine Catreux, Rami Mehio, Mian Umair Ahsan, Qian Liu, Kai Wang, Sayed Mohammad Ebrahim Sahraeian, Li Tai Fang, Marghoob Mohiyuddin, Calvin Hung, Chirag Jain, Hanying Feng, Zhipan Li, Luoqi Chen, Fritz J. Sedlazeck, Justin M. Zook
Publikováno v:
Cell genomics. 2(5)
The precisionFDA Truth Challenge V2 aimed to assess the state of the art of variant calling in challenging genomic regions. Starting with FASTQs, 20 challenge participants applied their variant-calling pipelines and submitted 64 variant call sets for
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a3e674f44cc6612dde91b563790f800
https://pubmed.ncbi.nlm.nih.gov/35720974
https://pubmed.ncbi.nlm.nih.gov/35720974
Publikováno v:
Journal of the American Medical Informatics Association : JAMIA
Artificial intelligence (AI) is critical to harnessing value from exponentially growing health and healthcare data. Expectations are high for AI solutions to effectively address current health challenges. However, there have been prior periods of ent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1cf245a8c51ab1819ff0d4c554b1ea86
https://doi.org/10.1093/jamia/ocab065
https://doi.org/10.1093/jamia/ocab065
Autor:
Martin Skarzynski, Erin M McAuley, Anthony C. Fries, Ezekiel J. Maier, Jameson D. Voss, Richard R Chapleau, Thomas F. Gibbons
Publikováno v:
Evol Med Public Health
Introduction The coronavirus disease 2019 (COVID-19) pandemic is a global public health emergency causing a disparate burden of death and disability around the world. The viral genetic variants associated with outcome severity are still being discove
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e50f1424ac8f83703b899017a773f7f
https://doi.org/10.1093/emph/eoab019
https://doi.org/10.1093/emph/eoab019
Autor:
Roshna Agarwal, Tyler Leblond, Erin M McAuley, Ezekiel J Maier, Martin Skarzynski, Jameson D Voss, Shanmuga Sozhamannan
SummaryWe previously interrogated the relationship between SARS-CoV-2 genetic mutations and associated patient outcomes using publicly available data downloaded from GISAID in October 2020 [1]. Using high-level patient data included in some GISAID su
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e65f5df93681e22f7f4db71f45d85af3
https://doi.org/10.1101/2022.04.15.22273922
https://doi.org/10.1101/2022.04.15.22273922
Autor:
Stacey R. Gish, Ezekiel J. Maier, Brian C. Haynes, Felipe H. Santiago-Tirado, Deepa L. Srikanta, Cynthia Z. Ma, Lucy X. Li, Matthew Williams, Erika C. Crouch, Shabaana A. Khader, Michael R. Brent, Tamara L. Doering
Publikováno v:
mBio, Vol 7, Iss 2 (2016)
ABSTRACT Cryptococcus neoformans is a ubiquitous, opportunistic fungal pathogen that kills over 600,000 people annually. Here, we report integrated computational and experimental investigations of the role and mechanisms of transcriptional regulation
Externí odkaz:
https://doaj.org/article/d87a9ac21823494f9eabd63ca287c8ad
Autor:
Ezekiel J. Maier, Anthony C. Fries, Jameson D. Voss, Richard R Chapleau, Erin M McAuley, Martin Skarzynski
Publikováno v:
Global Health, Epidemiology and Genomics.
The 2019 coronavirus disease (COVID-19) pandemic has demonstrated the importance of predicting, identifying, and tracking mutations throughout a pandemic event. As the COVID-19 global pandemic surpassed one year, several variants had emerged resultin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::88a5131e9eba06a99c88f54c46a53f0c
Autor:
Calvin Hung, Jean-Rémi Trotta, Severine Catreux, LinQi Tang, Kübra Narcı, Alexey Kolesnikov, Qian Liu, Mian Umair Ahsan, Emily Boja, Samuel T. Westreich, Özem Kalay, Andrew Carroll, Sinem Demirkaya-Budak, Ivan E. Johnson, Richard J. C. Brown, Benedict Paten, Howard Yang, Amit Jain, Genís Parra, José M. Lorenzo-Salazar, Ezekiel J. Maier, Mathieu Bourgey, ChouXian Ma, Justin Wagner, Miten Jain, Alexey Dolgoborodov, Mike Ruehle, Konstantinos Kyriakidis, David Jáspez, Omar Serang, Vladimir Semenyuk, Fritz J. Sedlazeck, Jordi Morata, Marghoob Mohiyuddin, Christian Brueffer, Chirag Jain, Li Tai Fang, Robert Eveleigh, Gunjan Baid, Sidharth Goel, Raul Tonda, Gungor Budak, Sarah H. Stephens, Maria Nattestad, ShaoWei Zhang, Deniz Turgut, Hanying Feng, Elaine Johanson, Luoqi Chen, H. Serhat Tetikol, Rami Mehio, Adrián Muñoz-Barrera, Gen Li, Guillaume Bourque, Duygu Kabakci-Zorlu, YuanPing Du, Trevor Pesout, Zhipan Li, Varun Jain, Nathan D. Olson, Sayed Mohammad Ebrahim Sahraeian, Anish G. Prasanna, Kishwar Shafin, Jennifer McDaniel, Bryan R. Lajoie, Pi-Chuan Chang, Justin M. Zook, Kai Wang, Cooper Roddey, Andigoni Malousi, Luis A. Rubio-Rodríguez, Carlos Flores, Elif Arslan
SummaryThe precisionFDA Truth Challenge V2 aimed to assess the state-of-the-art of variant calling in difficult-to-map regions and the Major Histocompatibility Complex (MHC). Starting with FASTQ files, 20 challenge participants applied their variant
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fa124f52f2cce6e8e82ee7f918a9a681
https://doi.org/10.1101/2020.11.13.380741
https://doi.org/10.1101/2020.11.13.380741
Publikováno v:
Bioinformatics
Motivation Cells process information, in part, through transcription factor (TF) networks, which control the rates at which individual genes produce their products. A TF network map is a graph that indicates which TFs bind and directly regulate each
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f93c0d1d912a990ce848d3d01c69ab9f
https://doi.org/10.1093/bioinformatics/btx563
https://doi.org/10.1093/bioinformatics/btx563
Publikováno v:
Lecture Notes in Computer Science ISBN: 9783030127374
AIH@IJCAI (Revised Selected Papers)
AIH@IJCAI (Revised Selected Papers)
Federal health agencies are currently developing regulatory strategies for Artificial Intelligence based medical products. Regulatory regimes need to account for the new risks and benefits that come with modern AI, including safety concerns and uniqu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6fd692345b7ed6bc50e231ceae0290e2
https://doi.org/10.1007/978-3-030-12738-1_6
https://doi.org/10.1007/978-3-030-12738-1_6