Expression of Genes in a Tumor and Its Microenvironment in Follicular Lymphoma.

Autor: Gorbunova, A. V., Krivolapov, Yu. A., Bozhokina, E. S., Evsyukov, I. V., Firuleva, M. M., Kharchenko, P. V.

Publikováno v: Cell & Tissue Biology; Sep2021, Vol. 15 Issue 5, p428-433, 6p

Genome-wide association study reveals genetic variants associated with HIV-1C infection in a Botswana study population.

Autor: Shevchenko AK; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia.; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia., Zhernakova DV; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia.; Department of Genetics, University Medical Center Groningen, University of Groningen, 9712 CP Groningen, The Netherlands., Malov SV; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia; sofiia.kolchanova@gmail.com lgdchief@gmail.com.; Department of Algorithmic Mathematics, Saint-Petersburg Electrotechnical University (LETI), 197022 St. Petersburg, Russia., Komissarov A; Applied Genomics Laboratory, Solution Chemistry of Advanced Materials and Technologies Institute, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia., Kolchanova SM; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia; sofiia.kolchanova@gmail.com lgdchief@gmail.com.; JetBrains Research, 197183 St. Petersburg, Russia., Tamazian G; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia., Antonik A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia., Cherkasov N; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia., Kliver S; Institute of Molecular and Cellular Biology, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia., Turenko A; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia., Rotkevich M; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russia., Evsyukov I; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia; sofiia.kolchanova@gmail.com lgdchief@gmail.com., Vlahov D; Yale University School of Nursing, Yale University, West Haven, CT 06477; sofiia.kolchanova@gmail.com lgdchief@gmail.com., Thami PK; Division of Human Genetics, Department of Pathology, Faculty of Health Sciences, University of Cape Town, 7925 Cape Town, South Africa.; Botswana Harvard AIDS Institute Partnership, Gaborone, Botswana., Gaseitsiwe S; Botswana Harvard AIDS Institute Partnership, Gaborone, Botswana.; Harvard T. H. Chan School of Public Health AIDS Initiative, Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Boston, MA 02115., Novitsky V; Botswana Harvard AIDS Institute Partnership, Gaborone, Botswana.; Division of Infectious Diseases, Department of Medicine, Brown University, Providence, RI 02906., Essex M; Botswana Harvard AIDS Institute Partnership, Gaborone, Botswana.; Harvard T. H. Chan School of Public Health AIDS Initiative, Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Boston, MA 02115., O'Brien SJ; Laboratory of Genomic Diversity, Center for Computer Technologies, Saint Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), 197101 St. Petersburg, Russia; sofiia.kolchanova@gmail.com lgdchief@gmail.com.; Guy Harvey Oceanographic Center, Halmos College of Arts and Sciences, Nova Southeastern University, Fort Lauderdale, FL 33004.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2021 Nov 23; Vol. 118 (47).

Pharmacokinetics of Two Forms of Recombinant Insulin-Like Growth Factor 1 in the Mouse Blood.

Autor: Dukhovlinov, I. V., Dobrovolskaya, O. A., Evsyukov, I. V., Bogomolova, E. G., Kolmakov, N. N., Lukovenko, A. A., Fedorova, E. A., Ishchuk, S. A., Orlov, A. I., Vorobeychikov, E. V., Simbirtsev, A. S.

Publikováno v: Cell & Tissue Biology; Nov2019, Vol. 13 Issue 6, p457-462, 6p

Genome-wide sequence analyses of ethnic populations across Russia.

Autor: Zhernakova DV; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Department of Genetics, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands. Electronic address: dashazhernakova@gmail.com., Brukhin V; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Malov S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Department of Mathematics, St. Petersburg Electrotechnical University, St. Petersburg, Russian Federation., Oleksyk TK; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Biology Department, University of Puerto Rico at Mayaguez, Mayaguez, Puerto Rico; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA., Koepfli KP; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; National Zoological Park, Smithsonian Conservation Biology Institute, Washington, DC, USA., Zhuk A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Vavilov Institute of General Genetics, Russian Academy of Sciences, St. Petersburg Branch, St. Petersburg, Russian Federation., Dobrynin P; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; National Zoological Park, Smithsonian Conservation Biology Institute, Washington, DC, USA., Kliver S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Cherkasov N; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Tamazian G; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Rotkevich M; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Krasheninnikova K; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Evsyukov I; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Sidorov S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Gorbunova A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; I.I. Mechnikov North-Western State Medical University, St. Petersburg, Russian Federation., Chernyaeva E; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Shevchenko A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Kolchanova S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Biology Department, University of Puerto Rico at Mayaguez, Mayaguez, Puerto Rico., Komissarov A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Simonov S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Antonik A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Logachev A; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Polev DE; Centre Biobank, Research Park, St. Petersburg State University, St. Petersburg, Russian Federation., Pavlova OA; Centre Biobank, Research Park, St. Petersburg State University, St. Petersburg, Russian Federation., Glotov AS; Laboratory of biobanking and genomic medicine of Institute of translation biomedicine, St. Petersburg State University, St. Petersburg, Russian Federation., Ulantsev V; Computer Technologies Laboratory, ITMO University, St. Petersburg, Russian Federation., Noskova E; Computer Technologies Laboratory, ITMO University, St. Petersburg, Russian Federation; JetBrains Research, St. Petersburg, Russian Federation., Davydova TK; Federal State Budgetary Scietific Institution, 'Yakut science center of complex medical problems', Yakutsk, Russian Federation., Sivtseva TM; Institute of Health, North-Eastern Federal University, Yakutsk, Russian Federation., Limborska S; Department of Molecular Bases of Human Genetics, Institute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russian Federation., Balanovsky O; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russian Federation; Research Centre for Medical Genetics, Moscow, Russian Federation; Biobank of North Eurasia, Moscow, Russian Federation., Osakovsky V; Institute of Health, North-Eastern Federal University, Yakutsk, Russian Federation., Novozhilov A; Department of Ethnography and Anthropology, St. Petersburg State University, St. Petersburg, Russian Federation., Puzyrev V; Research Institute of Medical Genetics, Tomsk National Research Medical Center, Russian Academy of Science, Tomsk, Russian Federation., O'Brien SJ; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, 8000 North Ocean Drive, Ft Lauderdale, Florida 33004, USA. Electronic address: lgdchief@gmail.com.

Publikováno v: Genomics [Genomics] 2020 Jan; Vol. 112 (1), pp. 442-458. Date of Electronic Publication: 2019 Mar 19.

Analytical "bake-off" of whole genome sequencing quality for the Genome Russia project using a small cohort for autoimmune hepatitis.

Autor: Zhernakova DV; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation.; University of Groningen, University Medical Center Groningen, Department of Genetics, Groningen, the Netherlands., Kliver S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Cherkasov N; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Tamazian G; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Rotkevich M; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Krasheninnikova K; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Evsyukov I; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Sidorov S; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Dobrynin P; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Yurchenko AA; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Shimansky V; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation., Shcherbakova IV; Research Resource Center for Molecular and Cell Technologies, Research Park, Saint-Petersburg State University, St. Petersburg, Russia., Glotov AS; Research Resource Center for Molecular and Cell Technologies, Research Park, Saint-Petersburg State University, St. Petersburg, Russia., Valle DL; Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, United States of America., Tang M; Wuzhou Red Cross Hospital, Guangxi, China., Shin E; Pediatric Liver Center, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, United States of America., Schwarz KB; Pediatric Liver Center, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, United States of America., O'Brien SJ; Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, Russian Federation.; Guy Harvey Oceanographic Center, Halmos College of Natural Sciences and Oceanography, Nova Southeastern University, Fort Lauderdale, Florida, United States of America.

Publikováno v: PloS one [PLoS One] 2018 Jul 11; Vol. 13 (7), pp. e0200423. Date of Electronic Publication: 2018 Jul 11 (Print Publication: 2018).