Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Evelin Despot-Slade"'
Autor:
Ana Paula Zotta Mota, Georgios D. Koutsovoulos, Laetitia Perfus-Barbeoch, Evelin Despot-Slade, Karine Labadie, Jean-Marc Aury, Karine Robbe-Sermesant, Marc Bailly-Bechet, Caroline Belser, Arthur Péré, Corinne Rancurel, Djampa K. Kozlowski, Rahim Hassanaly-Goulamhoussen, Martine Da Rocha, Benjamin Noel, Nevenka Meštrović, Patrick Wincker, Etienne G. J. Danchin
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-18 (2024)
Abstract Using long-read sequencing, we assembled and unzipped the polyploid genomes of Meloidogyne incognita, M. javanica and M. arenaria, three of the most devastating plant-parasitic nematodes. We found the canonical nematode telomeric repeat to b
Externí odkaz:
https://doaj.org/article/e48f9917fe904af48ea48b5abfb6148a
Autor:
Marin Volarić, Evelin Despot-Slade, Damira Veseljak, Martina Pavlek, Tanja Vojvoda Zeljko, Brankica Mravinac, Nevenka Meštrović
Publikováno v:
Genes, Vol 15, Iss 6, p 776 (2024)
5S ribosomal DNAs (rDNAs) are arranged in tandem and are often under-represented in genome assemblies. In the present study, we performed a global and in-depth analysis of the 5S rDNAs in the model insect Tribolium castaneum and its closely related s
Externí odkaz:
https://doaj.org/article/84656e55af62415cb093c5aa45eae65c
Autor:
Evelin Despot-Slade, Saša Širca, Brankica Mravinac, Philippe Castagnone-Sereno, Miroslav Plohl, Nevenka Meštrović
Publikováno v:
BMC Biology, Vol 20, Iss 1, Pp 1-19 (2022)
Abstract Background Satellite DNAs (satDNAs) are tandemly repeated non-coding DNA sequences that belong to the most abundant and the fastest evolving parts of the eukaryotic genome. A satellitome represents the collection of different satDNAs in a ge
Externí odkaz:
https://doaj.org/article/5dcdc7d681c14264849e4ab6afddd259
Autor:
Tena Gržan, Mira Dombi, Evelin Despot-Slade, Damira Veseljak, Marin Volarić, Nevenka Meštrović, Miroslav Plohl, Brankica Mravinac
Publikováno v:
Genes, Vol 14, Iss 5, p 999 (2023)
The red flour beetle Tribolium castaneum is an important pest of stored agricultural products and the first beetle whose genome was sequenced. So far, one high-copy-number and ten moderate-copy-number satellite DNAs (satDNAs) have been described in t
Externí odkaz:
https://doaj.org/article/178d7f40cb374d62a3d0687841922421
Publikováno v:
International Journal of Molecular Sciences, Vol 23, Iss 11, p 5869 (2022)
The flour beetle Tribolium freemani is a sibling species of the model organism and important pest Tribolium castaneum. The two species are so closely related that they can produce hybrid progeny, but the genetic basis of their differences has not bee
Externí odkaz:
https://doaj.org/article/e8dddad8eaee4646a7de661ed11921eb
Publikováno v:
PLoS Genetics, Vol 16, Iss 10, p e1009115 (2020)
Centromeres are chromosomal domains essential for kinetochore assembly and correct chromosome segregation. Inconsistent in their underlying DNA sequences, centromeres are defined epigenetically by the presence of the centromere-specific histone H3 va
Externí odkaz:
https://doaj.org/article/90a8539ba4b7467184f9f03e044a1324
Publikováno v:
Genes, Vol 12, Iss 8, p 1114 (2021)
The long-read Nanopore sequencing has been recently applied for assembly of complex genomes and analysis of linear genome organization. The most critical factor for successful long-read sequencing is extraction of high molecular weight (HMW) DNA of s
Externí odkaz:
https://doaj.org/article/b679f90bf94b4ba99b7ef428143d7bf4
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-11 (2017)
Abstract Cartilage tissue is avascular and hypoxic which regulates chondrocyte phenotype via stabilization of HIFs. Here, we investigated the role of hypoxia and HIFs in regulation of Rho and canonical Wnt signaling in chondrocytes. Our data demonstr
Externí odkaz:
https://doaj.org/article/71246e7466b540d6b3b8e6c716d9cfd4
Autor:
Monika Tunjić Cvitanić, Tanja Vojvoda Zeljko, Juan J. Pasantes, Daniel García-Souto, Tena Gržan, Evelin Despot-Slade, Miroslav Plohl, Eva Šatović
Publikováno v:
Genes, Vol 11, Iss 6, p 695 (2020)
Segments of the genome enriched in repetitive sequences still present a challenge and are omitted in genome assemblies. For that reason, the exact composition of DNA sequences underlying the heterochromatic regions and the active centromeres are stil
Externí odkaz:
https://doaj.org/article/072aa941f8a1420baad54d385e7a511e
Autor:
Etienne Danchin, Ana Paula Zotta Mota, Georgios Koutsovoulos, Laetitia Perfus-Barbeoch, Evelin Despot-Slade, Karine Labadie, Jean Marc Aury, Karine Robbe-Sermesant, Marc Bailly-Bechet, Caroline Belser, Arthur Pere, Corinne Rancurel, Djampa Kozlowski, Rahim Hassanaly-Goulamhoussen, Martine Da Rocha, Benjamin Noel, Nevenka Meštrović, Patrick Wincker
Using long read sequencing we have assembled and unzipped the genomes of Meloidogyne incognita, M. javanica and M. arenaria, the three most devastating plant-parasitic nematodes at unparalleled contiguity. The telomeric repeat (TTAGGC)n, evolutionari
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::578f47237d774c3f4ca6e1ef11b1c7db
https://doi.org/10.21203/rs.3.rs-2841030/v1
https://doi.org/10.21203/rs.3.rs-2841030/v1