Zobrazeno 1 - 10
of 56
pro vyhledávání: '"Espada, Rocío"'
Autor:
Marchi, Jacopo, Galpern, Ezequiel A., Espada, Rocio, Ferreiro, Diego U., Walczak, Aleksandra M., Mora, Thierry
Publikováno v:
PLoS Comput Biol 15(8): e1007282 (2019)
The coding space of protein sequences is shaped by evolutionary constraints set by requirements of function and stability. We show that the coding space of a given protein family--the total number of sequences in that family--can be estimated using m
Externí odkaz:
http://arxiv.org/abs/1905.04493
Natural protein sequences contain a record of their history. A common constraint in a given protein family is the ability to fold to specific structures, and it has been shown possible to infer the main native ensemble by analyzing covariations in ex
Externí odkaz:
http://arxiv.org/abs/1703.03449
Autor:
Espada, Rocío, Camacho-Sánchez, Adrián, Olaya-Ponzone, Liliana, Martín-Moreno, Estefanía, Patón, Daniel, García-Gómez, José Carlos
Publikováno v:
Environments (2076-3298); Jun2024, Vol. 11 Issue 6, p104, 45p
Akademický článek
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Some natural proteins display recurrent structural patterns. Despite being highly similar at the tertiary structure level, repetitions within a single repeat protein can be extremely variable at the sequence level. We propose a mathematical definitio
Externí odkaz:
http://arxiv.org/abs/1510.02469
Autor:
Dramé-Maigné, Adèle, Espada, Rocío, McCallum, Giselle, Sieskind, Rémi, Gines, Guillaume, Rondelez, Yannick
Publikováno v:
ACS Synthetic Biology; 2/16/2024, Vol. 13 Issue 2, p474-484, 11p
The analysis of correlations of amino acid occurrences in globular proteins has led to the development of statistical tools that can identify native contacts -- portions of the chains that come to close distance in folded structural ensembles. Here w
Externí odkaz:
http://arxiv.org/abs/1407.6903
The notion of energy landscapes provides conceptual tools for understanding the complexities of protein folding and function. Energy Landscape Theory indicates that it is much easier to find sequences that satisfy the "Principle of Minimal Frustratio
Externí odkaz:
http://arxiv.org/abs/1306.2852
Autor:
Espada, Rocío1 (AUTHOR), Zarevski, Nikola1 (AUTHOR), Dramé-Maigné, Adèle1 (AUTHOR), Rondelez, Yannick1 (AUTHOR) Yannick.Rondelez@espci.fr
Publikováno v:
GigaScience. 2022, Vol. 11, p1-8. 8p.
Akademický článek
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