Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape

Autor: Dishon M. Muloi, Bryan A. Wee, Deirdre M. H. McClean, Melissa J. Ward, Louise Pankhurst, Hang Phan, Alasdair C. Ivens, Velma Kivali, Alice Kiyong’a, Christine Ndinda, Nduhiu Gitahi, Tom Ouko, James M. Hassell, Titus Imboma, James Akoko, Maurice K. Murungi, Samuel M. Njoroge, Patrick Muinde, Yukiko Nakamura, Lorren Alumasa, Erin Furmaga, Titus Kaitho, Elin M. Öhgren, Fredrick Amanya, Allan Ogendo, Daniel J. Wilson, Judy M. Bettridge, John Kiiru, Catherine Kyobutungi, Cecila Tacoli, Erastus K. Kang’ethe, Julio D. Davila, Samuel Kariuki, Timothy P. Robinson, Jonathan Rushton, Mark E. J. Woolhouse, Eric M. Fèvre

Publikováno v: Muloi, D, Wee, B A, Mcclean, D, Ward, M, Pankhurst, L, Phan, H, Ivens, A, Kivali, V, Kiyonga, A, Ndinda, C, Gitahi, N, Ouko, T, Hassell, J M, Imboma, T, Akoko, J, Murungi, M K, Njoroge, S M, Muinde, P, Nakamura, Y, Alumasa, L, Furmaga, E, Kaitho, T, Öhgren, E, Amanya, F, Ogendo, A, Wilson, D, Bettridge, J, Kiiru, J, Kyobutungi, C, Tacoli, C, Kang'ethe, E, Davila, J, Kariuki, S, Robinson, T, Rushton, J, Woolhouse, M & Fèvre, E M 2022, ' Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape ', Nature Microbiology, vol. 7, no. 4, pp. 581-589 . https://doi.org/10.1038/s41564-022-01079-y
Nature Microbiology

Quantitative evidence for the risk of zoonoses and the spread of antimicrobial resistance remains lacking. Here, as part of the UrbanZoo project, we sampled Escherichia coli from humans, livestock and peri-domestic wildlife in 99 households across Na

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4adfb936122e3471f472e2a216196868
https://hdl.handle.net/20.500.11820/c3bb9655-0759-434b-84f1-275396abb1e8

Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study

Autor: Markus Hilty, Anne Oppliger, Suzanne Aebi, Julia Moor, Gudrun Overesch, Susanne Rickli, Nadezda Mostacci

Publikováno v: International journal of antimicrobial agents, vol. 58, no. 3, pp. 106382
Moor, Julia; Aebi, Susanne; Rickli, Susanne; Mostacci, Nadezda; Overesch, Gudrun; Oppliger, Anne; Hilty, Markus (2021). Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study. International journal of antimicrobial agents, 58(3), p. 106382. Elsevier 10.1016/j.ijantimicag.2021.106382

OBJECTIVES Point prevalence estimates of extended-spectrum cephalosporin-resistant Escherichia coli (ESC-R-Ec) are important surveillance measures but may not uncover the ESC-R-Ec dynamics within pig farms. A longitudinal study was therefore performe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2cf16f5e70f614f5ad01c63ce3d1141f
https://serval.unil.ch/notice/serval:BIB_765E7C4AE9DA

Shiga toxin-producing Escherichia coli: incidence and clinical features in a setting with complete screening of patients with suspected infective diarrhoea

Autor: Marc Trunjer Kusk Nielsen, Flemming S Rosenvinge, Hanne Marie Holt, Marianne Nielsine Skov, Steen Ethelberg, Rune Micha Pedersen, Flemming Scheutz, Sören Möller, Hans Jørn Kolmos

Publikováno v: Pedersen, R M, Nielsen, M T K, Möller, S, Ethelberg, S, Skov, M N, Kolmos, H J, Scheutz, F, Holt, H M & Rosenvinge, F S 2018, ' Shiga toxin-producing Escherichia coli : incidence and clinical features in a setting with complete screening of patients with suspected infective diarrhoea ', Clinical Microbiology and Infection, vol. 24, no. 6, pp. 635-639 . https://doi.org/10.1016/j.cmi.2017.10.002

Objectives: Shiga toxin-producing Escherichia coli (STEC) causes diarrhoeal disease, bloody diarrhoea, and haemolytic uraemic syndrome. The aim of this study was to describe the incidence of STEC and the clinical features of STEC patients from a well

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5de343ed0bb06ccbaeebd10281dd7cb
https://doi.org/10.1016/j.cmi.2017.10.002

Attributable sources of community-acquired carriage of Escherichia coli containing β-lactam antibiotic resistance genes: a population-based modelling study: a population-based modelling study

Autor: dIRAS RA-I&I I&I, One Health Microbieel, Dep Infectieziekten Immunologie, Sub Mathematical Modeling, dI&I I&I-4, LS Klinisch Onderzoek Wagenaar, dIRAS RA-I&I RA, Dep IRAS, Mathematical Modeling

Publikováno v: The Lancet Planetary Health, 3(8), e357. Elsevier

BACKGROUND Extended-spectrum β-lactamase-producing Escherichia coli (ESBL-EC), plasmid-mediated AmpC-producing E coli (pAmpC-EC), and other bacteria are resistant to important β-lactam antibiotics. ESBL-EC and pAmpC-EC are increasingly reported in

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=narcis______::40485e2c4385b42083dbaddf7c635f6c
https://dspace.library.uu.nl/handle/1874/387102

Hidden Carbapenem Resistance in OXA-48 and Extended-Spectrum β-Lactamase-Positive

Autor: Tomić Paradžik, Maja, Drenjančević, Domagoj, Presečki-Stanko, Aleksandra, Kopić, Jasminka, Talapko, Jasminka, Zarfel, Gernot, Bedenić, Branka

The purpose of this study was to report the identification OXA-48 carbapenemase in seven extended-spectrum β-lactamase (ESBL)-positive Escherichia coli clinical isolates, fully susceptible to all carbapenems by disk diffusion and E-test methods, but

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______4137::f5c77008832881c00925fa23b96a1222
https://doi.org/10.1089/mdr.2018.0309