Zobrazeno 1 - 10
of 33
pro vyhledávání: '"Ernst Oberortner"'
Autor:
James Alastair McLaughlin, Jacob Beal, Göksel Mısırlı, Raik Grünberg, Bryan A. Bartley, James Scott-Brown, Prashant Vaidyanathan, Pedro Fontanarrosa, Ernst Oberortner, Anil Wipat, Thomas E. Gorochowski, Chris J. Myers
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 8 (2020)
The Synthetic Biology Open Language (SBOL) is a community-developed data standard that allows knowledge about biological designs to be captured using a machine-tractable, ontology-backed representation that is built using Semantic Web technologies. W
Externí odkaz:
https://doaj.org/article/1d81fb42e7504d86aff6be45ec289cae
Autor:
Lukas Buecherl, Thomas Mitchell, James Scott-Brown, Prashant Vaidyanathan, Gonzalo Vidal, Hasan Baig, Bryan Bartley, Jacob Beal, Matthew Crowther, Pedro Fontanarrosa, Thomas Gorochowski, Raik Grünberg, Vishwesh Kulkarni, James McLaughlin, Göksel Mısırlı, Ernst Oberortner, Anil Wipat, Chris Myers
Publikováno v:
Journal of Integrative Bioinformatics. 20
Synthetic biology builds upon genetics, molecular biology, and metabolic engineering by applying engineering principles to the design of biological systems. When designing a synthetic system, synthetic biologists need to exchange information about mu
Autor:
Ernst, Oberortner, Robert, Evans, Xianwei, Meng, Sangeeta, Nath, Hector, Plahar, Lisa, Simirenko, Angela, Tarver, Samuel, Deutsch, Nathan J, Hillson, Jan-Fang, Cheng
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2205
Biological computer-aided design and manufacturing (bioCAD/CAM) tools facilitate the design and build processes of engineering biological systems using iterative design-build-test-learn (DBTL) cycles. In this book chapter, we highlight some of the bi
Autor:
Robert Evans, Jan Fang Cheng, Ernst Oberortner, Emily K. Bowman, Hal S. Alper, Matthew Deaner, Yasuo Yoshikuni
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, vol 117, iss 31
Proc Natl Acad Sci U S A
Proc Natl Acad Sci U S A
Most classic genetic approaches utilize binary modifications that preclude the identification of key knockdowns for essential genes or other targets that only require moderate modulation. As a complementary approach to these classic genetic methods,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01022580c5d3d3c99766be66cd3b7796
https://escholarship.org/uc/item/9cw6x2mr
https://escholarship.org/uc/item/9cw6x2mr
Autor:
Michael L. Blinov, Olga Krebs, Henning Hermjakob, David P. Nickerson, Sarah M. Keating, Ulrike Wittig, Matthias König, Padraig Gleeson, Melanie I. Stefan, Rahuman S Malik-Sheriff, Esther Thea Inau, Lucian P. Smith, Michael Hucka, Dagmar Waltemath, Falk Schreiber, Herbert M. Sauro, Chris J. Myers, Martin Golebiewski, Ernst Oberortner
Publikováno v:
Journal of Integrative Bioinformatics
Journal of Integrative Bioinformatics, Vol 17, Iss 2-3, Pp 19-895 (2020)
Journal of Integrative Bioinformatics, Vol 17, Iss 2-3, Pp 19-895 (2020)
This paper presents a report on outcomes of the 10th Computational Modeling in Biology Network (COMBINE) meeting that was held in Heidelberg, Germany, in July of 2019. The annual event brings together researchers, biocurators and software engineers t
Autor:
Thomas E. Gorochowski, Goksel Misirli, Chris J. Myers, Bryan Bartley, Matthew Crowther, Pedro Fontanarrosa, Anil Wipat, James Alastair McLaughlin, James Scott-Brown, Vishwesh V. Kulkarni, Hasan Baig, Raik Grünberg, Jacob Beal, Ernst Oberortner, Prashant Vaidyanathan
Publikováno v:
Journal of Integrative Bioinformatics
Journal of Integrative Bioinformatics, Vol 17, Iss 2-3 (2020)
Baig, H, Fontanarrosa, P, Kulkarni, V, McLaughlin, J A, Vaidyanathan, P, Bartley, B, Beal, J, Crowther, M, Gorochowski, T E, Grünberg, R, Misirli, G, Scott-Brown, J, Oberortner, E, Wipat, A & Myers, C J 2020, ' Synthetic biology open language (SBOL) version 3.0.0 ', Journal of Integrative Bioinformatics, vol. 2020, 20200017 . https://doi.org/10.1515/jib-2020-0017
Journal of Integrative Bioinformatics, Vol 17, Iss 2-3 (2020)
Baig, H, Fontanarrosa, P, Kulkarni, V, McLaughlin, J A, Vaidyanathan, P, Bartley, B, Beal, J, Crowther, M, Gorochowski, T E, Grünberg, R, Misirli, G, Scott-Brown, J, Oberortner, E, Wipat, A & Myers, C J 2020, ' Synthetic biology open language (SBOL) version 3.0.0 ', Journal of Integrative Bioinformatics, vol. 2020, 20200017 . https://doi.org/10.1515/jib-2020-0017
Synthetic biology builds upon genetics, molecular biology, and metabolic engineering by applying engineering principles to the design of biological systems. When designing a synthetic system, synthetic biologists need to exchange information about mu
Autor:
Bryan Bartley, Goksel Misirli, Anil Wipat, Jacob Beal, James Alastair McLaughlin, Thomas E. Gorochowski, Raik Grünberg, Pedro Fontanarrosa, James Scott-Brown, Prashant Vaidyanathan, Ernst Oberortner, Chris J. Myers
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 8 (2020)
McLaughlin, J A, Beal, J, Misirli, G, Grünberg, R, Bartley, B A, Scott-Brown, J, Vaidyanathan, P, Fontanarrosa, P, Oberortner, E, Wipat, A, Gorochowski, T E & Myers, C J 2020, ' The Synthetic Biology Open Language (SBOL) Version 3 : Simplified Data Exchange for Bioengineering ', Frontiers in Bioengineering and Biotechnology, vol. 8, 1009 . https://doi.org/10.3389/fbioe.2020.01009
McLaughlin, J A, Beal, J, Misirli, G, Grünberg, R, Bartley, B A, Scott-Brown, J, Vaidyanathan, P, Fontanarrosa, P, Oberortner, E, Wipat, A, Gorochowski, T E & Myers, C J 2020, ' The Synthetic Biology Open Language (SBOL) Version 3 : Simplified Data Exchange for Bioengineering ', Frontiers in Bioengineering and Biotechnology, vol. 8, 1009 . https://doi.org/10.3389/fbioe.2020.01009
The Synthetic Biology Open Language (SBOL) is a community-developed data standard that allows knowledge about biological designs to be captured using a machine-tractable, ontology-backed representation that is built using Semantic Web technologies. W
Autor:
Yash Kharbanda, Gledon Doçi, Ernst Oberortner, Johannes Kabisch, Neil Swainston, Lukas Fuchs, Valentin Zulkower, Paul Schickling, Nathan J. Hillson
Publikováno v:
Synthetic Biology, vol 5, iss 1
Synth Biol (Oxf)
Synth Biol (Oxf)
Author(s): Doci, G; Fuchs, L; Kharbanda, Y; Schickling, P; Zulkower, V; Hillson, N; Oberortner, E; Swainston, N; Kabisch, J | Abstract: DNA synthesis has become a major enabler of modern bioengineering, allowing scientists to simply order online in s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b9a46f57e4681e840641d54727cfc37
https://escholarship.org/uc/item/7f08512g
https://escholarship.org/uc/item/7f08512g
Autor:
Ernst Oberortner, Hector Plahar, Lisa Simirenko, Xianwei Meng, Robert Evans, Samuel Deutsch, Nathan J. Hillson, Sangeeta Nath, Angela Tarver, Jan Fang Cheng
Publikováno v:
Methods in Molecular Biology ISBN: 9781071609071
Biological computer-aided design and manufacturing (bioCAD/CAM) tools facilitate the design and build processes of engineering biological systems using iterative design-build-test-learn (DBTL) cycles. In this book chapter, we highlight some of the bi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::09542c8a5a93e6cf090bbf46825f0bc3
https://doi.org/10.1007/978-1-0716-0908-8_1
https://doi.org/10.1007/978-1-0716-0908-8_1
Publikováno v:
ACS Synthetic Biology. 6:485-496
Scaling-up capabilities for the design, build, and test of synthetic biology constructs holds great promise for the development of new applications in fuels, chemical production, or cellular-behavior engineering. Construct design is an essential comp