Zobrazeno 1 - 10
of 56
pro vyhledávání: '"Erin E Nuccio"'
Publikováno v:
PLoS ONE, Vol 5, Iss 1, p e8892 (2010)
BACKGROUND: Recovering endangered species would benefit from identifying and ranking of the factors that threaten them. Simply managing for multiple positive influences will often aid in recovery; however, the relative impacts of multiple threats and
Externí odkaz:
https://doaj.org/article/631414cd398d40a3b93aa1bde3e22e76
Autor:
Erin E. Nuccio, Steven J. Blazewicz, Marissa Lafler, Ashley N. Campbell, Anne Kakouridis, Jeffrey A. Kimbrel, Jessica Wollard, Dariia Vyshenska, Robert Riley, Andy Tomatsu, Rachel Hestrin, Rex R. Malmstrom, Mary Firestone, Jennifer Pett-Ridge
Publikováno v:
Microbiome, Vol 10, Iss 1, Pp 1-20 (2022)
Abstract Background Linking the identity of wild microbes with their ecophysiological traits and environmental functions is a key ambition for microbial ecologists. Of many techniques that strive for this goal, Stable-isotope probing—SIP—remains
Externí odkaz:
https://doaj.org/article/aaedad4abe404cb49b94c8c41011730f
Publikováno v:
mSystems, Vol 8, Iss 5 (2023)
ABSTRACT Interactions between plant roots and rhizosphere bacteria modulate nitrogen (N)-cycling processes and create habitats rich in low molecular weight compounds (exudates) and complex organic molecules (decaying root litter) compared to those of
Externí odkaz:
https://doaj.org/article/7acff0c287e44e3daacc6c6eb5c23c13
Autor:
Dariia Vyshenska, Pranav Sampara, Kanwar Singh, Andy Tomatsu, W. Berkeley Kauffman, Erin E. Nuccio, Steven J. Blazewicz, Jennifer Pett-Ridge, Katherine B. Louie, Neha Varghese, Matthew Kellom, Alicia Clum, Robert Riley, Simon Roux, Emiley A. Eloe-Fadrosh, Ryan M. Ziels, Rex R. Malmstrom
Publikováno v:
mSystems, Vol 8, Iss 4 (2023)
ABSTRACT Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic enrichment of nucleic acids. Many DNA-SIP studies rely on 16S rRNA gene sequences to ident
Externí odkaz:
https://doaj.org/article/89714e1557644055a52c06f7ca084abc
Autor:
Alex Greenlon, Ella Sieradzki, Olivier Zablocki, Benjamin J. Koch, Megan M. Foley, Jeffrey A. Kimbrel, Bruce A. Hungate, Steven J. Blazewicz, Erin E. Nuccio, Christine L. Sun, Aaron Chew, Cynthia-Jeanette Mancilla, Matthew B. Sullivan, Mary Firestone, Jennifer Pett-Ridge, Jillian F. Banfield
Publikováno v:
mSystems, Vol 7, Iss 6 (2022)
ABSTRACT The growth and physiology of soil microorganisms, which play vital roles in biogeochemical cycling, are shaped by both current and historical soil environmental conditions. Here, we developed and applied a genome-resolved metagenomic impleme
Externí odkaz:
https://doaj.org/article/9f70a72e87d84aacabb7327935142f5e
Autor:
Gareth Trubl, Jeffrey A. Kimbrel, Jose Liquet-Gonzalez, Erin E. Nuccio, Peter K. Weber, Jennifer Pett-Ridge, Janet K. Jansson, Mark P. Waldrop, Steven J. Blazewicz
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-15 (2021)
Abstract Background Winter carbon loss in northern ecosystems is estimated to be greater than the average growing season carbon uptake and is primarily driven by microbial decomposers. Viruses modulate microbial carbon cycling via induced mortality a
Externí odkaz:
https://doaj.org/article/513bf342f8ab4d30987693416c182276
Autor:
Alexa M. Nicolas, Alexander L. Jaffe, Erin E. Nuccio, Michiko E. Taga, Mary K. Firestone, Jillian F. Banfield
Publikováno v:
mSystems, Vol 6, Iss 4 (2021)
ABSTRACT Candidate Phyla Radiation (CPR) bacteria and nanoarchaea populate most ecosystems but are rarely detected in soil. We concentrated particles of less than 0.2 μm in size from grassland soil, enabling targeted metagenomic analysis of these or
Externí odkaz:
https://doaj.org/article/3050fb382cf64b31844d538dc0e6bd45
Autor:
Rachel Hestrin, Megan Kan, Marissa Lafler, Jessica Wollard, Jeffrey A. Kimbrel, Prasun Ray, Steven J. Blazewicz, Rhona Stuart, Kelly Craven, Mary Firestone, Erin E. Nuccio, Jennifer Pett-Ridge
Publikováno v:
The ISME journal, vol 16, iss 12
Drought disrupts soil microbial activity and many biogeochemical processes. Although plant-associated fungi can support plant performance and nutrient cycling during drought, their effects on nearby drought-exposed soil microbial communities are not
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::caa6ac433b356ba0325cb162a7806a80
https://doi.org/10.1038/s41396-022-01308-6
https://doi.org/10.1038/s41396-022-01308-6
Publikováno v:
The ISME journal, vol 17, iss 7
Nitrogen (N) is frequently limiting to plant growth, in part because most soil N is present as polymeric organic compounds that are not readily taken up by plants. Microbial depolymerization of these large macromolecular N-substrates gradually releas
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c943612499a15e45be328e4fb4acae23
https://escholarship.org/uc/item/438035xq
https://escholarship.org/uc/item/438035xq
Publikováno v:
The ISME Journal.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::168be6c85e7f78fbb4ddd997a8daca5d
https://doi.org/10.1038/s41396-023-01441-w
https://doi.org/10.1038/s41396-023-01441-w