Zobrazeno 1 - 10
of 39
pro vyhledávání: '"Eric K. Wafula"'
Autor:
Noah P. Winters, Eric K. Wafula, Benjamin J. Knollenberg, Tuomas Hämälä, Prakash R. Timilsena, Melanie Perryman, Dapeng Zhang, Lena L. Sheaffer, Craig A. Praul, Paula E. Ralph, Sarah Prewitt, Mariela E. Leandro-Muñoz, Diego A. Delgadillo-Duran, Naomi S. Altman, Peter Tiffin, Siela N. Maximova, Claude W. dePamphilis, James H. Marden, Mark J. Guiltinan
Publikováno v:
BMC Biology, Vol 22, Iss 1, Pp 1-24 (2024)
Abstract Background Plants have complex and dynamic immune systems that have evolved to resist pathogens. Humans have worked to enhance these defenses in crops through breeding. However, many crops harbor only a fraction of the genetic diversity pres
Externí odkaz:
https://doaj.org/article/32cdbb857f4846538897c35353ba284f
Autor:
Eric K. Wafula, Huiting Zhang, Gregory Von Kuster, James H. Leebens-Mack, Loren A. Honaas, Claude W. dePamphilis
Publikováno v:
Frontiers in Plant Science, Vol 13 (2023)
Plant genome-scale resources are being generated at an increasing rate as sequencing technologies continue to improve and raw data costs continue to fall; however, the cost of downstream analyses remains large. This has resulted in a considerable ran
Externí odkaz:
https://doaj.org/article/653db73e860e47f983cffd271bba8fd2
Autor:
Prakash Raj Timilsena, Eric K. Wafula, Craig F. Barrett, Saravanaraj Ayyampalayam, Joel R. McNeal, Jeremy D. Rentsch, Michael R. McKain, Karolina Heyduk, Alex Harkess, Matthieu Villegente, John G. Conran, Nicola Illing, Bruno Fogliani, Cécile Ané, J. Chris Pires, Jerrold I. Davis, Wendy B. Zomlefer, Dennis W. Stevenson, Sean W. Graham, Thomas J. Givnish, James Leebens-Mack, Claude W. dePamphilis
Publikováno v:
Frontiers in Plant Science, Vol 13 (2022)
We assess relationships among 192 species in all 12 monocot orders and 72 of 77 families, using 602 conserved single-copy (CSC) genes and 1375 benchmarking single-copy ortholog (BUSCO) genes extracted from genomic and transcriptomic datasets. Phyloge
Externí odkaz:
https://doaj.org/article/251682fdada7476dab1f51d9b098173d
Autor:
Huiting Zhang, Eric K. Wafula, Jon Eilers, Alex E. Harkess, Paula E. Ralph, Prakash Raj Timilsena, Claude W. dePamphilis, Jessica M. Waite, Loren A. Honaas
Publikováno v:
Frontiers in Plant Science, Vol 13 (2022)
The rapid development of sequencing technologies has led to a deeper understanding of plant genomes. However, direct experimental evidence connecting genes to important agronomic traits is still lacking in most non-model plants. For instance, the gen
Externí odkaz:
https://doaj.org/article/1f6cf7314626403ea27d107575bd9b3b
Publikováno v:
BMC Plant Biology, Vol 19, Iss 1, Pp 1-18 (2019)
Abstract Background Root parasitic weeds are a major constraint to crop production worldwide causing significant yearly losses in yield and economic value. These parasites cause their destruction by attaching to their hosts with a unique organ, the h
Externí odkaz:
https://doaj.org/article/4e16cc4b16934769b8b63874a93854ed
Autor:
Prakash Raj Timilsena, Craig F Barrett, Alma Piñeyro-Nelson, Eric K Wafula, Saravanaraj Ayyampalayam, Joel R McNeal, Tomohisa Yukawa, Thomas J Givnish, Sean W Graham, J Chris Pires, Jerrold I Davis, Cécile Ané, Dennis W Stevenson, Jim Leebens-Mack, Esteban Martínez-Salas, Elena R Álvarez-Buylla, Claude W dePamphilis
Publikováno v:
Genome Biology and Evolution. 15
Mycoheterotrophy is an alternative nutritional strategy whereby plants obtain sugars and other nutrients from soil fungi. Mycoheterotrophy and associated loss of photosynthesis have evolved repeatedly in plants, particularly in monocots. Although red
Autor:
Paula E. Ralph, Huiting Zhang, Prakash R. Timilsena, Claude W. dePamphilis, Eric K. Wafula, Loren A. Honaas, Jessica M. Waite, Jon Eilers, Alex Harkess
The rapid development of sequencing technologies has led to a deeper understanding of horticultural plant genomes. However, experimental evidence connecting genes to important agronomic traits is still lacking in most non-model organisms. For instanc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::91229c627e5ddb8fc01180e31ed9efb4
https://doi.org/10.1101/2021.11.17.467977
https://doi.org/10.1101/2021.11.17.467977
Autor:
Tuomas, Hämälä, Eric K, Wafula, Mark J, Guiltinan, Paula E, Ralph, Claude W, dePamphilis, Peter, Tiffin
Publikováno v:
Proc Natl Acad Sci U S A
Genomic structural variants (SVs) can play important roles in adaptation and speciation. Yet the overall fitness effects of SVs are poorly understood, partly because accurate population-level identification of SVs requires multiple high-quality genom
Autor:
Naomi Altman, Wen-Bin Yu, Saima Shahid, Claude W. dePamphilis, Joel R. McNeal, Michael J. Axtell, Zhenzhen Yang, Prakash R. Timilsena, Gunjune Kim, James H. Westwood, Elizabeth A. Kelly, Paula E. Ralph, Huiting Zhang, Eric K. Wafula, Thomas N. Person
Publikováno v:
Nature Plants. 5:991-1001
Horizontal gene transfer (HGT), the movement and genomic integration of DNA across species boundaries, is commonly associated with bacteria and other microorganisms, but functional HGT (fHGT) is increasingly being recognized in heterotrophic parasiti
Autor:
Nnanna Unachukwu, Paula E. Ralph, Jesse R. Lasky, Emily S. Bellis, Michael P. Timko, Sarah Hearne, Lua Lopez, Eric K. Wafula, Loren A. Honaas, Claude W. dePamphilis
Publikováno v:
Weed Science. 67:397-411
Host-specific interactions can maintain genetic and phenotypic diversity in parasites that attack multiple host species. Host diversity, in turn, may promote parasite diversity by selection for genetic divergence or plastic responses to host type. Th