Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes

Autor: Ferdinand Marlétaz, Arnaud Couloux, Julie Poulain, Karine Labadie, Corinne Da Silva, Sophie Mangenot, Benjamin Noel, Albert J. Poustka, Philippe Dru, Cinta Pegueroles, Marco Borra, Elijah K. Lowe, Guy Lhomond, Lydia Besnardeau, Stéphanie Le Gras, Tao Ye, Daria Gavriouchkina, Roberta Russo, Caterina Costa, Francesca Zito, Letizia Anello, Aldo Nicosia, Maria Antonietta Ragusa, Marta Pascual, M. Dolores Molina, Aline Chessel, Marta Di Carlo, Xavier Turon, Richard R. Copley, Jean-Yves Exposito, Pedro Martinez, Vincenzo Cavalieri, Smadar Ben Tabou de Leon, Jenifer Croce, Paola Oliveri, Valeria Matranga, Maria Di Bernardo, Julia Morales, Patrick Cormier, Anne-Marie Geneviève, Jean Marc Aury, Valérie Barbe, Patrick Wincker, Maria Ina Arnone, Christian Gache, Thierry Lepage

Publikováno v: Cell Genom
Cell Genomics
Cell Genomics, 2023, 3 (4), pp.100295. ⟨10.1016/j.xgen.2023.100295⟩

International audience; Sea urchins are emblematic models in developmental biology and display several characteristics that set them apart from other deuterostomes. To uncover the genomic cues that may underlie these specificities, we generated a chr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d287e13b2b25b32de6496d1c3229fdc1
http://hdl.handle.net/2445/197226

Sex-specific transcriptomic differences in the immune cells of a key Atlantic-Mediterranean sea urchin

Autor: Rocío Pérez-Portela, Carlos Leiva

Publikováno v: Dipòsit Digital de la UB
Universidad de Barcelona

The abundance of the black sea urchin, Arbacia lixula, has been increasing during the last decades likely related to global warming. This thermophilous species has a leading role in maintaining marine barrens in the Mediterranean with the consequent

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43c86eb9f1a1d68e9c54632bc91089c0
http://hdl.handle.net/2445/189806

DNA metabarcoding unveils niche overlapping and competition among Caribbean sea urchins

Autor: Owen S. Wangensteen, Kim Præbel, Ruber Rodríguez-Barreras, Filipa Godoy-Vitorino

Detailed information of trophic interactions among consumer–resources in food webs is usually limited due to the lack of accurate identification of eaten food resources. The use of DNA-metabarcoding has been proven useful for molecular identificati

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::545309f98ed38ebbb72a0768f151125c
https://hdl.handle.net/10037/19855

The sea urchin metallothionein system: Comparative evaluation of the SpMTA and SpMTB metal-binding preferences☆

Autor: Tomas, Mireia, Domènech Casal, Jordi, Capdevila Vidal, Mercè, Bofill, Roger, Atrian i Ventura, Sílvia

Publikováno v: FEBS Open Bio
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
Dipòsit Digital de la UB
Universidad de Barcelona
Recercat. Dipósit de la Recerca de Catalunya
instname

Metallothioneins (MTs) constitute a superfamily of ubiquitous metal-binding proteins of low molecular weight and high Cys content. They are involved in metal homeostasis and detoxification, amongst other proposed biological functions. Two MT isoforms

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::43adc887c67ec5f5cf294c5915d62a5b
http://europepmc.org/articles/PMC3668524

Microsatellite markers reveal shallow genetic differentiation between cohorts of the common sea urchinParacentrotus lividus(Lamarck) in northwest Mediterranean

Autor: Xavier Turon, I. Calderón, Cruz Palacín

Publikováno v: Dipòsit Digital de la UB
Universidad de Barcelona
Recercat. Dipósit de la Recerca de Catalunya
instname
Digital.CSIC. Repositorio Institucional del CSIC

14 Páginas ; 5 Figuras ; 4 Tablas ; 1 Apéndice
TemporalvariabilitywasstudiedinthecommonseaurchinParacentrotuslividusthroughthe analysis of the genetic composition of three yearly cohorts sampled over two consecutive springsinalocalityinnorthwe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::41cd23a9a4040a9fd6a7f220a3ff5a18
https://doi.org/10.1111/j.1365-294x.2009.04239.x