Zobrazeno 1 - 10
of 26
pro vyhledávání: '"Erbay Yigit"'
Autor:
Sebastian Grünberg, Lindsey A Doyle, Eric J Wolf, Nan Dai, Ivan R Corrêa, Erbay Yigit, Barry L Stoddard
Publikováno v:
PLoS ONE, Vol 18, Iss 11, p e0291267 (2023)
The chemical modification of RNA bases represents a ubiquitous activity that spans all domains of life. Pseudouridylation is the most common RNA modification and is observed within tRNA, rRNA, ncRNA and mRNAs. Pseudouridine synthase or 'PUS' enzymes
Externí odkaz:
https://doaj.org/article/72166ebde15b489b82d143155259afc0
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
The SARS-CoV-2 viral genome contains a positive-strand single-stranded RNA of ∼30 kb. Human ACE2 protein is the receptor for SARS-CoV-2 virus attachment and infection. We propose to use ribonucleases (RNases) as antiviral agents to destroy the vira
Externí odkaz:
https://doaj.org/article/a49ee93ac12144d0b2b782c712df862c
Autor:
Yajuan Zhao, Leanna DelGrosso, Erbay Yigit, D'Maris Amick Dempsey, Daniel F. Klessig, Kristin K. Wobbe
Publikováno v:
Molecular Plant-Microbe Interactions, Vol 13, Iss 9, Pp 1015-1018 (2000)
We have isolated three naturally occurring strains of Turnip crinkle virus (TCV) that break resistance in Di-17 Arabidopsis. Two mutations in the N terminus of the TCV coat protein, D4N and P5S, were shown to confer this phenotype. Thus, this region
Externí odkaz:
https://doaj.org/article/bd508bc72a3a455bba793cac18b1902b
Autor:
George R Feehery, Erbay Yigit, Samuel O Oyola, Bradley W Langhorst, Victor T Schmidt, Fiona J Stewart, Eileen T Dimalanta, Linda A Amaral-Zettler, Theodore Davis, Michael A Quail, Sriharsa Pradhan
Publikováno v:
PLoS ONE, Vol 8, Iss 10, p e76096 (2013)
DNA samples derived from vertebrate skin, bodily cavities and body fluids contain both host and microbial DNA; the latter often present as a minor component. Consequently, DNA sequencing of a microbiome sample frequently yields reads originating from
Externí odkaz:
https://doaj.org/article/6da99fd218a841248a8712394ffdcfe4
Publikováno v:
PLoS Pathogens, Vol 5, Iss 2, p e1000286 (2009)
Dicer ribonucleases of plants and invertebrate animals including Caenorhabditis elegans recognize and process a viral RNA trigger into virus-derived small interfering RNAs (siRNAs) to guide specific viral immunity by Argonaute-dependent RNA interfere
Externí odkaz:
https://doaj.org/article/938f1fb81fcc4c0d993d6cf5f00c6ce1
Publikováno v:
Applications in Plant Sciences, Vol 2, Iss 11, p 1400064 (2014)
Premise of the study: Variation in the distribution of methylated CpG (methyl-CpG) in genomic DNA (gDNA) across the tree of life is biologically interesting and useful in genomic studies. We illustrate the use of human methyl-CpG-binding domain (MBD2
Externí odkaz:
https://doaj.org/article/65a78dcfc7da48ef9df3f58665e06ec9
Autor:
Eric J Wolf, Sebastian Grünberg, Nan Dai, Tien-Hao Chen, Bijoyita Roy, Erbay Yigit, Ivan R Corrêa
Publikováno v:
Nucleic acids research. 50(18)
With the rapid growth of synthetic messenger RNA (mRNA)-based therapeutics and vaccines, the development of analytical tools for characterization of long, complex RNAs has become essential. Tandem liquid chromatography–mass spectrometry (LC–MS/MS
Autor:
Sebastian Grünberg, Erbay Yigit, Tien-Hao Chen, Nan Dai, Baptiste Coxam, Nicole M. Nichols, Ivan R. Corrêa, Lana Saleh
Publikováno v:
Nucleic Acids Research
Since its initial characterization, Escherichia coli RNase I has been described as a single-strand specific RNA endonuclease that cleaves its substrate in a largely sequence independent manner. Here, we describe a strong calcium (Ca2+)-dependent acti
Autor:
Sebastian Grünberg, Lindsey A. Doyle, Eric J. Wolf, Nan Dai, Ivan R. Corrêa, Erbay Yigit, Barry L. Stoddard
The chemical modification of RNA bases represents a ubiquitous activity that spans all domains of life. Pseudouridylation is the most common RNA modification and is observed within tRNA, rRNA, ncRNA and mRNAs. Pseudouridine synthase or ‘PUS’ enzy
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2b8b103a8140504450f8f6f6338cca07
https://doi.org/10.1101/2021.12.08.471817
https://doi.org/10.1101/2021.12.08.471817
The SARS-CoV-2 viral genome contains a positive-strand single-stranded RNA of ~30 kb. Human ACE2 protein is the receptor for SARS-CoV-2 virus attachment and initiation of infection. We propose to use ribonucleases (RNases) as antiviral agents to dest
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2c0f33d32a14a7280874fd559a9f6a82
https://doi.org/10.1101/2021.01.31.429007
https://doi.org/10.1101/2021.01.31.429007