New insights from Thailand into the maternal genetic history of Mainland Southeast Asia

Autor: Alexander Hübner, Roland Schröder, Silvia Ghirotto, Metawee Srikummool, Andrea Brunelli, Enrico Macholdt, Daoroong Kangwanpong, Leonardo Arias Alvis, Sukhum Ruangchai, Wibhu Kutanan, Pittayawat Pittayaporn, Jatupol Kampuansai, Mark Stoneking

Publikováno v: European Journal of Human Genetics, 26, 898-911. NATURE PUBLISHING GROUP
European Journal of Human Genetics

Tai-Kadai (TK) is one of the major language families in Mainland Southeast Asia (MSEA), with a concentration in the area of Thailand and Laos. Our previous study of 1,234 mtDNA genome sequences supported a demic diffusion scenario in the spread of TK

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3d3285452760c2a6ec72999fc13abe96
https://doi.org/10.1038/s41431-018-0113-7

Contrasting paternal and maternal genetic histories of Thai and Lao populations

Autor: Leonardo Arias, Andrea Brunelli, Alexander Hübner, Silvia Ghirotto, Enrico Macholdt, Wibhu Kutanan, Jatupol Kampuansai, Roland Schröder, Metawee Srikummool, Mark Stoneking

Publikováno v: Molecular Biology and Evolution

The human demographic history of Mainland Southeast Asia (MSEA) has not been well studied; in particular, there have been very few sequence-based studies of variation in the male-specific portions of the Y chromosome (MSY). Here, we report new MSY se

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7427d2487bcbac8014353edcadc5003a
http://hdl.handle.net/11392/2416027

Contrasting maternal and paternal genetic variation of hunter-gatherer groups in Thailand

Autor: Piya Changmai, Pavel Flegontov, Enrico Macholdt, Jatupol Kampuansai, Daoroong Kangwanpong, Wibhu Kutanan, Roland Schröder, Alexander Hübner, Mark Stoneking

Publikováno v: Scientific Reports
Scientific Reports, Vol 8, Iss 1, Pp 1-9 (2018)

The Maniq and Mlabri are the only recorded nomadic hunter-gatherer groups in Thailand. Here, we sequenced complete mitochondrial (mt) DNA genomes and ~2.364 Mbp of non- recombining Y chromosome (NRY) to learn more about the origins of these two enigm

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::768c8b5c897fc7ded085f1c281d49183
https://hdl.handle.net/21.11116/0000-0000-6F86-D21.11116/0000-0000-6F88-B

Refining the Y chromosome phylogeny with southern African sequences

Autor: Chiara Barbieri, Roland Schröder, Lutz Roewer, Mark Stoneking, Brigitte Pakendorf, Alexander Hübner, Enrico Macholdt, Sununguko Wata Mpoloka, Shengyu Ni, Josephine Purps, Sebastian Lippold

Publikováno v: Human Genetics
Human Genetics, Springer Verlag, 2016, 135 (5), pp.541-553. ⟨10.1007/s00439-016-1651-0⟩

The recent availability of large-scale sequence data for the human Y chromosome has revolutionized analyses of and insights gained from this non-recombining, paternally inherited chromosome. However, the studies to date focus on Eurasian variation, a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::117098125c06c65c2d4eea54e33cff9d
https://hdl.handle.net/11858/00-001M-0000-002A-2339-911858/00-001M-0000-002A-1B45-A11858/00-001M-0000-002A-233A-7

A genomic history of Aboriginal Australia

Autor: Sankar Subramanian, David M. Lambert, Pascale Gerbault, Joe Dortch, Stephan Peischl, Marta Mirazón Lahr, Sturla Ellingvåg, Nicolas Brucato, Anna-Sapfo Malaspinas, Gudjugudju Fourmile, François-Xavier Ricaut, William Pomat, Simon Rasmussen, Mark Stoneking, Tim H. Heupink, Mait Metspalu, Michael C. Westaway, J. Víctor Moreno-Mayar, Shengyu Ni, Aubrey Lynch, Elizabeth Matisoo-Smith, Fernando Racimo, Joanne L. Wright, Anders Albrechtsen, Farhang Aghakhanian, Andrea Manica, Warren Clark, Ivan P. Levkivskyi, Yali Xue, Thomas Wales, Rasmus Nielsen, Andrea Bamberg Migliano, Alexander J. Mentzer, Craig Muller, Laurent Excoffier, Anders Bergström, Irina Pugach, Thomas Mailund, Søren Brunak, Jacob E. Crawford, Richard Durbin, Paula F. Campos, Anders Eriksson, Claire Bowern, George Koki, Enrico Macholdt, Manjinder S. Sandhu, Ashot Margaryan, Les Murgha, Betty Logan, Vitor C. Sousa, Thorfinn Sand Korneliussen, Maude E. Phipps, Jade Yu Cheng, Isabel Alves, Stephan Schiffels, Eske Willerslev, Colleen Ma Run Wall, Robert Foley, Georgios Athanasiadis, Chris Tyler-Smith, Stephen Oppenheimer, Oscar Lao, Mark G. Thomas, Ida Moltke, Darren Injie, Jeffrey D. Wall, Mikkel H. Schierup, Chiara Barbieri, Doc Reynolds, Peter McAllister, Peter Siba, Martin Sikora, Matthew Leavesley, Isabelle Dupanloup

Publikováno v: Nature
Nature, Nature Publishing Group, 2016, 538 (7624), pp.207-214. ⟨10.1038/nature18299⟩
Malaspinas, A-S, Westaway, M C, Muller, C, Sousa, V C, Lao, O, Alves, I, Athanasiadis, G, Cheng, J Y, Crawford, J E, Heupink, T H, Macholdt, E, Peischl, S, Schiffels, S, Subramanian, S, Wright, J L, Albrechtsen, A, Barbieri, C, Dupanloup, I, Eriksson, A, Margaryan, A, Moltke, I, Pugach, I, Korneliussen, T S, Levkivskyi, I P, Moreno-Mayar, J V, Ni, S, Racimo, F, Sikora, M, Xue, Y, Aghakhanian, F A, Brucato, N, Brunak, S, Campos, P F, Clark, W, Ellingvåg, S, Fourmile, G, Gerbault, P, Injie, D, Koki, G, Leavesley, M, Logan, B, Lynch, A, Matisoo-Smith, E A, McAllister, P J, Mentzer, A J, Metspalu, M, Migliano, A B, Murgha, L, Phipps, M E, Pomat, W, Reynolds, D, Ricaut, F-X, Siba, P, Thomas, M G, Wales, T, Wall, C M, Oppenheimer, S J, Tyler-Smith, C, Durbin, R, Dortch, J, Manica, A, Schierup, M H, Foley, R A, Lahr, M M, Bowern, C, Wall, J D, Mailund, T, Stoneking, M, Sandhu, M S, Excoffier, L, Lambert, D M & Willerslev, E 2016, ' A genomic history of Aboriginal Australia ', Nature, vol. 538, no. 7624, pp. 207-214 . https://doi.org/10.1038/nature18299
Nature, 2016, 538 (7624), pp.207-214. ⟨10.1038/nature18299⟩
Malaspinas, A-S, Westaway, M C, Muller, C, Sousa, V C, Lao, O, Alves, I, Bergström, A, Athanasiadis, G, Cheng, J Y, Crawford, J E, Rasmussen, S, Albrechtsen, A, Margaryan, A, Moltke, I, Korneliussen, T S, Moreno-Mayar, J V, Sikora, M, Brunak, S, Campos, P F, Schierup, M H, Foley, R A, Lahr, M M, Mailund, T, Nielsen, R & Willerslev, E 2016, ' A genomic history of Aboriginal Australia ', Nature, vol. 538, no. 7624, pp. 207-214 . https://doi.org/10.1038/nature18299

The population history of Aboriginal Australians remains largely uncharacterised, not least because of a lack of extensive genomic data. We generated high-coverage genomes for 83 geographically diverse Aboriginal Australians (all speakers of Pama-Nyu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::31b1eb7eb27b7c21774ed0e488f78a3f