Nucleos'ID: A New Search Engine Enabling the Untargeted Identification of RNA Post-transcriptional Modifications from Tandem Mass Spectrometry Analyses of Nucleosides

Autor: Clarisse Gosset-Erard, Mévie Didierjean, Jérome Pansanel, Antony Lechner, Philippe Wolff, Lauriane Kuhn, Frédéric Aubriet, Emmanuelle Leize-Wagner, Patrick Chaimbault, Yannis-Nicolas François

Publikováno v: Analytical chemistry.

As RNA post-transcriptional modifications are of growing interest, several methods were developed for their characterization. One of them established for their identification, at the nucleosidic level, is the hyphenation of separation methods, such a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::232486dd9c8c739a3abf69882d44ad9a
https://pubmed.ncbi.nlm.nih.gov/36598775

Hyphenation of Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) with separation methods: The art of compromises and the possible - A review

Autor: Clarisse Gosset-Erard, Frédéric Aubriet, Emmanuelle Leize-Wagner, Yannis-Nicolas François, Patrick Chaimbault

Publikováno v: Talanta. 257:124324

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f23bf170ab2296b4d2646e856c5d9bc2
https://doi.org/10.1016/j.talanta.2023.124324

NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies

Autor: Miyako Nakano, Alena Wiegandt, Yunli Hu, Viv Lindo, Paulina A. Urbanowicz, Zsuzsanna Lakos, Cassie Caron, Song Klapoetke, Niels Christian Reichardt, Niclas Chiang Tan, Sandra Maier, Rene Hennig, Marton Szigeti, Ju Yeon Lee, Ying Qing Yu, Gregory O. Staples, Sachin Patil, Jolanta Jaworek, Waltraud Evers, Benjamin G. Kremkow, Youngsuk Seo, Kathirvel Alagesan, Yuetian Chen, Gordan Lauc, David L. Duewer, Yang Yang, Daniele Menard, Hyun Joo An, Tim Kelly, Stephen E. Stein, Joseph W. Leone, Anja Wiechmann, Ravi Amunugama, Peng George Wang, Clemens Grunwald-Grube, Maria Lorna A. De Leoz, Göran Larson, Rob Haselberg, Samanta Cajic, Stephanie A. Archer-Hartmann, Maja Pučić-Baković, Edward D. Bodnar, Pauline M. Rudd, Anja Resemann, Daniel Kolarich, Akira Harazono, Jeffrey S. Rohrer, Juan Echevarria Ruiz, Stuart Pengelley, Jong Shin Yoo, Arun V. Everest-Dass, Nicolle H. Packer, Steven W. Mast, William R. Alley, Erika Lattová, Anne Zeck, Corné J.M. Stroop, Radoslaw P. Kozak, Chun Shao, Alain Beck, Joseph Zaia, Erdmann Rapp, Lily Liu, Jennie Truong, Yaojun Wang, Christopher W. Cairo, Roisin O'Flaherty, Radka Saldova, Kudrat Goswami, Emy Komatsu, Jessica Örnros, Taiki Sugiyama, Prachi Bhoskar, Pralima Pradhan, Carlito B. Lebrilla, András Guttman, Christine Merle, Brian Kasper, Oscar G. Potter, Soo Kyung Suh, Li Phing Liew, Ranjan Chakrabarti, Terry D. Cyr, Sohei Funaoka, Masaaki Toyoda, Pui King Amy Leung, Toyin Kasali, Jerko Štambuk, Yanming An, Wolfgang Jabs, Bernd Meyer, Chunxia Zou, John F. Cipollo, Sa Rang Kim, Aaron Shafer, Randy M. Whittal, Jichao Kang, Albert J. R. Heck, Yehia Mechref, Hoi Kei Yau, Guinevere S. M. Lageveen-Kammeijer, Shiwei Sun, Kenichiro Furuki, Richard B. Jones, Béla Reiz, Niclas G. Karlsson, Mohammedazam Lahori, Xu Li, Barbara Adamczyk, Rui Cao, Lauren Wu, Koichi Kato, Detlev Suckau, Paweł Link-Lenczowski, Kelvin H. Lee, Xiaomin Song, Noortje de Haan, Ruth Frenkel, Adam Fung, Friedrich Altmann, Manfred Wuhrer, David Falck, Andreas Bock, Paula Magnelli, Brian Gau, Sachiko Kondo, Robert J. Emery, Chunsheng Jin, Louise Royle, David C. Muddiman, Hélène Perreault, John W. Froehlich, Disha Dadke, Peiqing Zhang, Lara K. Mahal, Takashi Nishikaze, Andrew Saati, Chuncui Huang, Hui Zhang, Carina Sihlbom, Parastoo Azadi, Jonas Nilsson, Yaming Liu, Yannis-Nicolas François, Nassur Said, Jin Young Kim, C. T. Yuen, Shuang Yang, Emmanuelle Leize-Wagner, David Harvey, Xiaofeng Shi, Yan Li, Hirokazu Yagi, Zoran Sosic, Elizabeth M. Hecht, Hua Yuan, Marybeth Creskey, Hyun Kyoung Lee, Sadanori Sekiya, Peter de Vreugd, Len Bell, Sam Tep

Publikováno v: De Leoz, M L A, Duewer, D L, Fung, A, Liu, L, Yau, H K, Potter, O, Staples, G O, Furuki, K, Frenkel, R, Hu, Y, Sosic, Z, Zhang, P, Altmann, F, Gru Nwald-Grube, C, Shao, C, Zaia, J, Evers, W, Pengelley, S, Suckau, D, Wiechmann, A, Resemann, A, Jabs, W, Beck, A, Froehlich, J W, Huang, C, Li, Y, Liu, Y, Sun, S, Wang, Y, Seo, Y, An, H J, Reichardt, N C, Ruiz, J E, Archer-Hartmann, S, Azadi, P, Bell, L, Lakos, Z, An, Y, Cipollo, J F, Pucic-Bakovic, M, Štambuk, J, Lauc, G, Li, X, Wang, P G, Bock, A, Hennig, R, Rapp, E, Creskey, M, Cyr, T D, Nakano, M, Sugiyama, T, Leung, P K A, Link-Lenczowski, P, Jaworek, J, Yang, S, Zhang, H, Kelly, T, Klapoetke, S, Cao, R, Kim, J Y, Lee, H K, Lee, J Y, Yoo, J S, Kim, S R, Suh, S K, de Haan, N, Falck, D, Lageveen-Kammeijer, G S M, Wuhrer, M, Emery, R J, Kozak, R P, Liew, L P, Royle, L, Urbanowicz, P A, Packer, N H, Song, X, Everest-Dass, A, Lattová, E, Cajic, S, Alagesan, K, Kolarich, D, Kasali, T, Lindo, V, Chen, Y, Goswami, K, Gau, B, Amunugama, R, Jones, R, Stroop, C J M, Kato, K, Yagi, H, Kondo, S, Yuen, C T, Harazono, A, Shi, X, Magnelli, P E, Kasper, B T, Mahal, L, Harvey, D J, O'Flaherty, R, Rudd, P M, Saldova, R, Hecht, E S, Muddiman, D C, Kang, J, Bhoskar, P, Menard, D, Saati, A, Merle, C, Mast, S, Tep, S, Truong, J, Nishikaze, T, Sekiya, S, Shafer, A, Funaoka, S, Toyoda, M, de Vreugd, P, Caron, C, Pradhan, P, Tan, N C, Mechref, Y, Patil, S, Rohrer, J S, Chakrabarti, R, Dadke, D, Lahori, M, Zou, C, Cairo, C, Reiz, B, Whittal, R M, Lebrilla, C B, Wu, L, Guttman, A, Szigeti, M, Kremkow, B G, Lee, K H, Sihlbom, C, Adamczyk, B, Jin, C, Karlsson, N G, Örnros, J, Larson, G, Nilsson, J, Meyer, B, Wiegandt, A, Komatsu, E, Perreault, H, Bodnar, E D, Said, N, Francois, Y N, Leize-Wagner, E, Maier, S, Zeck, A, Heck, A J R, Yang, Y, Haselberg, R, Yu, Y Q, Alley, W, Leone, J W, Yuan, H & Stein, S E 2020, ' NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies : Comparison of Results from Diverse Analytical Methods ', MCP : Molecular & cellular proteomics, vol. 19, no. 1, pp. 11-30 . https://doi.org/10.1074/mcp.RA119.001677
Molecular and Cellular Proteomics, 19(1), 11-30. AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC
MCP : Molecular & cellular proteomics, 19(1), 11-30. American Society for Biochemistry and Molecular Biology Inc.
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics, 19(1), 11-30. AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC
Molecular and Cellular Proteomics
Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2019, mcp.RA119.001677. ⟨10.1074/mcp.RA119.001677⟩
Molecular and Cellular Proteomics, 19(1), 11. American Society for Biochemistry and Molecular Biology Inc.
Molecular & Cellular Proteomics : MCP

A broad-based interlaboratory study of glycosylation profiles of a reference and modified IgG antibody involving 103 reports from 76 laboratories.
Graphical Abstract Highlights A broad-based interlaboratory study of the glycosylation of a refere

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4214e7f722323aeb909a6ec71f3d6bbd
https://doi.org/10.1074/mcp.RA119.001677

Alkynylgold(I) C 3 -Chiral Concave Complexes: Aggregation and Luminescence

Autor: Jing Zhang, Astrid Schaly, Jean‐Claude Chambron, Bruno Vincent, Nathalie Zorn, Emmanuelle Leize‐Wagner, Marion Jean, Nicolas Vanthuyne

Publikováno v: Chemistry-A European Journal
Chemistry-A European Journal, 2022, ⟨10.1002/chem.202103759⟩

International audience; Chiral gold(I) acetylide trinuclear complexes 1 - 3 based on the cyclotribenzylene platform and terminal PR3 ligands (R = Ph, Et, and Cy, respectively), were characterized and their light emission studied. They exhibited long-

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e50c75473a91b7b0e4610ad105fec0b6
https://hal.science/hal-03852718

Optimization of nucleotides dephosphorylation for RNA structural characterization by tandem mass spectrometry hyphenated with separation methods

Autor: Clarisse Gosset-Erard, Antony Lechner, Philippe Wolff, Frédéric Aubriet, Emmanuelle Leize-Wagner, Patrick Chaimbault, Yannis-Nicolas François

Publikováno v: Journal of Chromatography B. 1208:123396

As part of RNA characterization, the identification of post-transcriptional modifications can be performed using hyphenation of separation methods with mass spectrometry. To identify RNA modifications with those methods, a first total digestion follo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a4cae1b8b0bb589ca3739f4b49c85fa7
https://doi.org/10.1016/j.jchromb.2022.123396