Zobrazeno 1 - 10
of 61
pro vyhledávání: '"Emily E. Burke"'
Autor:
Nicholas J. Eagles, Emily E. Burke, Jacob Leonard, Brianna K. Barry, Joshua M. Stolz, Louise Huuki, BaDoi N. Phan, Violeta Larios Serrato, Everardo Gutiérrez-Millán, Israel Aguilar-Ordoñez, Andrew E. Jaffe, Leonardo Collado-Torres
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-18 (2021)
Abstract Background RNA sequencing (RNA-seq) is a common and widespread biological assay, and an increasing amount of data is generated with it. In practice, there are a large number of individual steps a researcher must perform before raw RNA-seq re
Externí odkaz:
https://doaj.org/article/e0035110078a4411ba9279c7b5f5f571
Autor:
Emily E. Burke, Joshua G. Chenoweth, Joo Heon Shin, Leonardo Collado-Torres, Suel-Kee Kim, Nicola Micali, Yanhong Wang, Carlo Colantuoni, Richard E. Straub, Daniel J. Hoeppner, Huei-Ying Chen, Alana Sellers, Kamel Shibbani, Gregory R. Hamersky, Marcelo Diaz Bustamante, BaDoi N. Phan, William S. Ulrich, Cristian Valencia, Amritha Jaishankar, Amanda J. Price, Anandita Rajpurohit, Stephen A. Semick, Roland W. Bürli, James C. Barrow, Daniel J. Hiler, Stephanie C. Page, Keri Martinowich, Thomas M. Hyde, Joel E. Kleinman, Karen F. Berman, Jose A. Apud, Alan J. Cross, Nicholas J. Brandon, Daniel R. Weinberger, Brady J. Maher, Ronald D. G. McKay, Andrew E. Jaffe
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020)
Here, authors present results of a hiPSC transcriptomics study on corticogenesis from multiple donors across four transitions in differentiation. They present a bulk data deconvolution method and show that co-culturing human NPCs with rodent astrocyt
Externí odkaz:
https://doaj.org/article/a91415f76f3b4ff6b00a1fb9ef500aaf
Autor:
Amanda J. Price, Leonardo Collado-Torres, Nikolay A. Ivanov, Wei Xia, Emily E. Burke, Joo Heon Shin, Ran Tao, Liang Ma, Yankai Jia, Thomas M. Hyde, Joel E. Kleinman, Daniel R. Weinberger, Andrew E. Jaffe
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-20 (2019)
Abstract Background DNA methylation (DNAm) is a critical regulator of both development and cellular identity and shows unique patterns in neurons. To better characterize maturational changes in DNAm patterns in these cells, we profile the DNAm landsc
Externí odkaz:
https://doaj.org/article/2d0ac030c90f4a369eb9351bf54f5cdb
Autor:
Carrie Wright, Anandita Rajpurohit, Emily E. Burke, Courtney Williams, Leonardo Collado-Torres, Martha Kimos, Nicholas J. Brandon, Alan J. Cross, Andrew E. Jaffe, Daniel R. Weinberger, Joo Heon Shin
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-21 (2019)
Abstract Background RNA sequencing offers advantages over other quantification methods for microRNA (miRNA), yet numerous biases make reliable quantification challenging. Previous evaluations of these biases have focused on adapter ligation bias with
Externí odkaz:
https://doaj.org/article/27901c70dc3342d4822f75b17d50b28f
Autor:
Nicholas J. Eagles, Emily E. Burke, Jacob Leonard, Brianna K. Barry, Joshua M. Stolz, Louise Huuki, BaDoi N. Phan, Violeta Larios Serrato, Everardo Gutiérrez-Millán, Israel Aguilar-Ordoñez, Andrew E. Jaffe, Leonardo Collado-Torres
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-2 (2021)
Externí odkaz:
https://doaj.org/article/1f22d9a4a2184490ab6359bd8acb9161
Autor:
Peter P. Zandi, Andrew E. Jaffe, Fernando S. Goes, Emily E. Burke, Leonardo Collado-Torres, Louise Huuki-Myers, Arta Seyedian, Yian Lin, Fayaz Seifuddin, Mehdi Pirooznia, Christopher A. Ross, Joel E. Kleinman, Daniel R. Weinberger, Thomas M. Hyde
Publikováno v:
Nature Neuroscience. 25:381-389
Autor:
Wilfried Mai, Emily E. Burke, Jennifer A. Reetz, Silke Hecht, Matthew Paek, Molly E. Church, Stephen R. Werre, Christopher L. Mariani, John F. Griffin, Eric N. Glass
Publikováno v:
Veterinary Radiology & Ultrasound. 63:176-184
Intracranial extra-axial histiocytic sarcoma shares common MRI features with meningioma. As histiocytic sarcoma carries a generally worse prognosis than meningioma, the ability to differentiate between these two neoplasms is of clinical value. The ai
Autor:
Jeremy Hall, Michael Conlon O'Donovan, Daniel R. Weinberger, Michael John Owen, Nicholas E. Clifton, James T.R. Walters, Janet C Harwood, Leonardo Collado-Torres, Antonio F. Pardiñas, Arianna Di Florio, Peter Holmans, Emily E. Burke, Andrew E. Jaffe
Publikováno v:
Biological Psychiatry
BackgroundRecent breakthroughs in psychiatric genetics have implicated biological pathways onto which genetic risk for psychiatric disorders converges. However, these studies do not reveal the developmental time point(s) at which these pathways are r
Autor:
Everardo Gutiérrez-Millán, Emily E. Burke, Nicholas J. Eagles, Jacob Leonard, Leonardo Collado-Torres, Brianna K. Barry, Joshua M. Stolz, Israel Aguilar-Ordoñez, Louise A Huuki, Violeta Larios Serrato, Andrew E. Jaffe, BaDoi N. Phan
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-2 (2021)
BMC Bioinformatics
BMC Bioinformatics
RNA sequencing (RNA-seq) is a common and widespread biological assay, and an increasing amount of data is generated with it. In practice, there are a large number of individual steps a researcher must perform before raw RNA-seq reads yield directly v
Autor:
Joshua M. Stolz, Violeta Larios Serrato, Everardo Gutiérrez-Millán, BaDoi N. Phan, Emily E. Burke, Israel Aguilar-Ordoñez, Leonardo Collado-Torres, Brianna K. Barry, Andrew E. Jaffe, Louise A Huuki, Nicholas J. Eagles, Jabob Leonard
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-18 (2021)
BMC Bioinformatics
BMC Bioinformatics
Background RNA sequencing (RNA-seq) is a common and widespread biological assay, and an increasing amount of data is generated with it. In practice, there are a large number of individual steps a researcher must perform before raw RNA-seq reads yield