Zobrazeno 1 - 10
of 21
pro vyhledávání: '"Elyse Stachler"'
Autor:
Katharina Jahn, David Dreifuss, Ivan Topolsky, Anina Kull, Pravin Ganesanandamoorthy, Xavier Fernandez-Cassi, Carola Bänziger, Alexander J. Devaux, Elyse Stachler, Lea Caduff, Federica Cariti, Alex Tuñas Corzón, Lara Fuhrmann, Chaoran Chen, Kim Philipp Jablonski, Sarah Nadeau, Mirjam Feldkamp, Christian Beisel, Catharine Aquino, Tanja Stadler, Christoph Ort, Tamar Kohn, Timothy R. Julian, Niko Beerenwinkel
Publikováno v:
nature microbiology
Nature Microbiology, 7 (8)
Nature Microbiology, 7 (8)
The continuing emergence of SARS-CoV-2 variants of concern and variants of interest emphasizes the need for early detection and epidemiological surveillance of novel variants. We used genomic sequencing of 122 wastewater samples from three locations
Autor:
Jana S. Huisman, Jérémie Scire, Lea Caduff, Xavier Fernandez-Cassi, Pravin Ganesanandamoorthy, Anina Kull, Andreas Scheidegger, Elyse Stachler, Alexandria B. Boehm, Bridgette Hughes, Alisha Knudson, Aaron Topol, Krista R. Wigginton, Marlene K. Wolfe, Tamar Kohn, Christoph Ort, Tanja Stadler, Timothy R. Julian
Publikováno v:
Environmental Health Perspectives, 130 (5)
Dipòsit Digital de la UB
Universidad de Barcelona
Dipòsit Digital de la UB
Universidad de Barcelona
Background: The effective reproductive number, Re, is a critical indicator to monitor disease dynamics, inform regional and national policies, and estimate the effectiveness of interventions. It describes the average number of new infections caused b
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::373b8c88cdf580d86c00d768be05af16
https://hdl.handle.net/20.500.11850/557148
https://hdl.handle.net/20.500.11850/557148
Autor:
Lea Caduff, David Dreifuss, Tobias Schindler, Alexander J Devaux, Pravin Ganesanandamoorthy, Anina Kull, Elyse Stachler, Xavier Fernandez-Cassi, Niko Beerenwinkel, Tamar Kohn, Christoph Ort, Timothy R Julian
Publikováno v:
Dipòsit Digital de la UB
Universidad de Barcelona
Eurosurveillance, 27 (10)
Universidad de Barcelona
Eurosurveillance, 27 (10)
Background Throughout the COVID-19 pandemic, SARS-CoV-2 genetic variants of concern (VOCs) have repeatedly and independently arisen. VOCs are characterised by increased transmissibility, increased virulence or reduced neutralisation by antibodies obt
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::66b730860a9ef99e967d42f3edf790f3
http://hdl.handle.net/2445/184812
http://hdl.handle.net/2445/184812
Publikováno v:
FEMS Microbiology Ecology, 98 (8)
Opportunistic pathogens belonging to the genus Legionella are among the most reported waterborne-associated pathogens in industrialized countries. Legionella colonize a variety of engineered aquatic ecosystems and persist in biofilms where they inter
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b97a6443b372d8638ba4658178ee972
Autor:
David Dreifuss, Xavier Fernandez-Cassi, Timothy R. Julian, Elyse Stachler, Alexander J. devaux, Anina Kull, Lea Caduff, Christoph Ort, Pravin Ganesanandamoorthy, Tamar Kohn, Tobias Schindler, Niko Beerenwinkel
Throughout the global COVID-19 pandemic, SARS-CoV-2 genetic variants of concern (VOCs) have repeatedly and independently arisen. VOCs are characterized by increased transmissibility, increased virulence, or reduced neutralization by antibodies obtain
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e422dd7bfe0b4a309dca0f93c48dc2b3
https://doi.org/10.1101/2021.08.22.21262024
https://doi.org/10.1101/2021.08.22.21262024
Autor:
Tanja Stadler, Bridgette Hughes, Lea Caduff, Timothy R. Julian, Christoph Ort, Jérémie Scire, Alexandria B. Boehm, Pravin Ganesanandamoorthy, Marlene K. Wolfe, Xavier Fernandez-Cassi, Alisha Knudson, Anina Kull, Tamar Kohn, Aaron Topol, Andreas Scheidegger, Jana S. Huisman, Krista R. Wigginton, Elyse Stachler
The effective reproductive number, Re, is a critical indicator to monitor disease dynamics, inform regional and national policies, and estimate the effectiveness of interventions. It describes the average number of new infections caused by a single i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f0e6cb207d5116dd64abff0119c39698
https://doi.org/10.1101/2021.04.29.21255961
https://doi.org/10.1101/2021.04.29.21255961
Autor:
Steven R. Head, Emma Billings, Stephen Wandro, Jane M. Carlton, Alexandra Zhernakova, A. Murat Eren, Zhe Xue Quan, Anders S. Nilsson, Gyu Sung Cho, Udi Qimron, Martin M. Kowalewski, John Shimashita, Gillian A.O. Rice, Frank Møller Aarestrup, Elyse Stachler, Vito Adrian Cantu, Linsey C. Marr, Alessandro Rossi, Angela McCann, Colin Hill, Cristina García-Aljaro, Kristen M. Gulino, David A. Lipson, Rene S. Hendriksen, Bryan A. White, Bas E. Dutilh, Bashir Mukhtar Elwasila, Karla Mazankova, Alexander V. Tyakht, Julia M. Maritz, Ronan Strain, Rodrigo De la Iglesia, Ramy K. Aziz, Kyle Levi, Alan Twaddle, Alejandro Reyes Muñoz, Katelyn McNair, Alejandro A. Vega, Nathaniel J. Dominy, Abigail E. Asangba, Robert Edwards, Rasha Odeh, Olivia D. Nigro, Gunduz Ahmadov, Raúl R. Raya, Nam Nguyen, Charles M. A. P. Franz, Nicole Trefault, Adán Ramírez-Rojas, Michael P. Doane, Randall E. Junge, Patrick A. de Jonge, Jingyuan Fu, Taylor O'Connell, Mike Cranfield, German Tapia, Heikki Hyöty, Nicolás A. Villagra, Cisca Wijmenga, Henrike Zschach, Megan M. Morris, Franklin L. Nobrega, Elena N. Ilina, David Thomas McCarthy, Daniel Cazares, Silvia Monteiro, Lawrence Mugisha, Daniel A. Cuevas, Horst Neve, Przemyslaw Decewicz, John M. Haggerty, Ricardo Santos, Deepak Kumaresan, Shahar Molshanski-Mor, Andrew S. Whiteley, Benjamin Moreira-Grez, Rebecca M. Stumpf, Katrine Whiteson, Holly M. Norman, Jeremy J. Barr, Peter C. Fineran, Jeroen Wagemans, Samuel L. Díaz Muñoz, Kim Reasor, Elizabeth A. Dinsdale, Mitchell T. Irwin, Aaron J. Prussin, Mohammadali Khan Mirzaei, Maite Muniesa, Christelle Desnues, Montserrat Llagostera, Rob Lavigne, Abeer Alassaf, Tess Condeff, Petra Rainetova, María Mercedes Zambrano, Adrian Cazares, Elodie Ghedin, Alexander Kurilshikov, Lukasz Dziewit, Thomas C. Jeffries, Mary Ann Ugochi Ibekwe, Eugenia S. Lisitsyna, Juan Jofre, Pedro J. Torres, Maria Ohaeri, Mariana Piuri, Andrew Oliver, Steven R. Leigh, Ondrej Cinek, Stan J. J. Brouns, Josefa Antón, Pilar Cortés, Kyle Bibby, Lars C. Stene, Pablo Vinuesa, Scott T. Kelley
Publikováno v:
Nature Microbiology
Nature Microbiology, 2019, 4, pp.1727-1736. ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727. Nature Publishing Group
Nat Microbiol
Edwards, R A, Vega, A A, Norman, H M, Ohaeri, M, Levi, K, Dinsdale, E A, Cinek, O, Aziz, R K, McNair, K, Barr, J J, Bibby, K, Brouns, S J J, Cazares, A, de Jonge, P A, Desnues, C, Díaz Muñoz, S L, Fineran, P C, Kurilshikov, A, Lavigne, R, Mazankova, K, McCarthy, D T, Nobrega, F L, Reyes Muñoz, A, Tapia, G, Trefault, N, Tyakht, A V, Vinuesa, P, Wagemans, J, Zhernakova, A, Møller Aarestrup, F, Ahmadov, G, Alassaf, A, Anton, J, Asangba, A, Billings, E K, Cantu, V A, Carlton, J M, Cazares, D, Cho, G S, Condeff, T, Cortés, P, Cranfield, M, Cuevas, D A, De la Iglesia, R, Decewicz, P, Doane, M P, Dominy, N J, Dziewit, L, Elwasila, B M, Eren, A M, Franz, C, Fu, J, Garcia-Aljaro, C, Ghedin, E, Gulino, K M, Haggerty, J M, Head, S R, Hendriksen, R S, Hill, C, Hyöty, H, Ilina, E N, Irwin, M T, Jeffries, T C, Jofre, J, Junge, R E, Kelley, S T, Khan Mirzaei, M, Kowalewski, M, Kumaresan, D, Leigh, S R, Lipson, D, Lisitsyna, E S, Llagostera, M, Maritz, J M, Marr, L C, McCann, A, Molshanski-Mor, S, Monteiro, S, Moreira-Grez, B, Morris, M, Mugisha, L, Muniesa, M, Neve, H, Nguyen, N P, Nigro, O D, Nilsson, A S, O’Connell, T, Odeh, R, Oliver, A, Piuri, M, Prussin, A J, Qimron, U, Quan, Z X, Rainetova, P, Ramírez-Rojas, A, Raya, R, Reasor, K, Rice, G A O, Rossi, A, Santos, R, Shimashita, J, Stachler, E N, Stene, L C, Strain, R, Stumpf, R, Torres, P J, Twaddle, A, Ugochi Ibekwe, M A, Villagra, N, Wandro, S, White, B, Whiteley, A, Whiteson, K L, Wijmenga, C, Zambrano, M M, Zschach, H & Dutilh, B E 2019, ' Global phylogeography and ancient evolution of the widespread human gut virus crAssphage ', Nature Microbiology, vol. 4, pp. 1727-1736 . https://doi.org/10.1038/s41564-019-0494-6
Nature Microbiology, Nature Publishing Group, 2019, ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727-1736
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)
Nature Microbiology, 4(10), 1727-1736. Nature Publishing Group
Nature Microbiology, 4, 10, pp. 1727-1736
Nature Microbiology, 2019, 4, pp.1727-1736. ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727. Nature Publishing Group
Nat Microbiol
Edwards, R A, Vega, A A, Norman, H M, Ohaeri, M, Levi, K, Dinsdale, E A, Cinek, O, Aziz, R K, McNair, K, Barr, J J, Bibby, K, Brouns, S J J, Cazares, A, de Jonge, P A, Desnues, C, Díaz Muñoz, S L, Fineran, P C, Kurilshikov, A, Lavigne, R, Mazankova, K, McCarthy, D T, Nobrega, F L, Reyes Muñoz, A, Tapia, G, Trefault, N, Tyakht, A V, Vinuesa, P, Wagemans, J, Zhernakova, A, Møller Aarestrup, F, Ahmadov, G, Alassaf, A, Anton, J, Asangba, A, Billings, E K, Cantu, V A, Carlton, J M, Cazares, D, Cho, G S, Condeff, T, Cortés, P, Cranfield, M, Cuevas, D A, De la Iglesia, R, Decewicz, P, Doane, M P, Dominy, N J, Dziewit, L, Elwasila, B M, Eren, A M, Franz, C, Fu, J, Garcia-Aljaro, C, Ghedin, E, Gulino, K M, Haggerty, J M, Head, S R, Hendriksen, R S, Hill, C, Hyöty, H, Ilina, E N, Irwin, M T, Jeffries, T C, Jofre, J, Junge, R E, Kelley, S T, Khan Mirzaei, M, Kowalewski, M, Kumaresan, D, Leigh, S R, Lipson, D, Lisitsyna, E S, Llagostera, M, Maritz, J M, Marr, L C, McCann, A, Molshanski-Mor, S, Monteiro, S, Moreira-Grez, B, Morris, M, Mugisha, L, Muniesa, M, Neve, H, Nguyen, N P, Nigro, O D, Nilsson, A S, O’Connell, T, Odeh, R, Oliver, A, Piuri, M, Prussin, A J, Qimron, U, Quan, Z X, Rainetova, P, Ramírez-Rojas, A, Raya, R, Reasor, K, Rice, G A O, Rossi, A, Santos, R, Shimashita, J, Stachler, E N, Stene, L C, Strain, R, Stumpf, R, Torres, P J, Twaddle, A, Ugochi Ibekwe, M A, Villagra, N, Wandro, S, White, B, Whiteley, A, Whiteson, K L, Wijmenga, C, Zambrano, M M, Zschach, H & Dutilh, B E 2019, ' Global phylogeography and ancient evolution of the widespread human gut virus crAssphage ', Nature Microbiology, vol. 4, pp. 1727-1736 . https://doi.org/10.1038/s41564-019-0494-6
Nature Microbiology, Nature Publishing Group, 2019, ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727-1736
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)
Nature Microbiology, 4(10), 1727-1736. Nature Publishing Group
Nature Microbiology, 4, 10, pp. 1727-1736
Microbiomes are vast communities of microorganisms and viruses that populate all natural ecosystems. Viruses have been considered to be the most variable component of microbiomes, as supported by virome surveys and examples of high genomic mosaicism.
Publikováno v:
Environmental Science & Technology Letters. 6:216-221
Environments that receive fecal pollution are reservoirs of antibiotic resistance. Recent metagenomic observations suggest that the fecal pollution indicator crAssphage correlates with the occurren...
Autor:
Justin Greaves, Katherine Crank, Xiang Li, Kyle Bibby, Elyse Stachler, Ibrahim Ahmed Hamza, Zhenyu Wu
Publikováno v:
npj Clean Water, Vol 2, Iss 1, Pp 1-13 (2019)
Human exposure to pathogenic viruses in environmental waters results in a significant global disease burden. Current microbial water quality monitoring approaches, mainly based on fecal indicator bacteria, insufficiently capture human health impacts
Autor:
Kim Philipp Jablonski, Katharina Jahn, Sarah Nadeau, Christian Beisel, David Dreifuss, Mirjam Feldkamp, Lea Caduff, Tanja Stadler, Lara Fuhrmann, Federica Cariti, Elyse Stachler, Chaoran Chen, Carola Bänziger, Catharine Aquino, Tamar Kohn, Anina Kull, Timothy R. Julian, Alexander J. devaux, Christoph Ort, Pravin Ganesanandamoorthy, Ivan Topolsky, Alex Tunas Corzon, Xavier Fernandez-Cassi, Niko Beerenwinkel
The emergence of SARS-CoV-2 mutants with altered transmissibility, virulence, or immunogenicity emphasizes the need for early detection and epidemiological surveillance of genomic variants. Wastewater samples provide an opportunity to assess circulat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::93f9efc79aafbb92535c7d4ec14cd2d5
https://doi.org/10.1101/2021.01.08.21249379
https://doi.org/10.1101/2021.01.08.21249379